481. Unravelling genetic etiology of cerebral palsy : findings from a Slovenian pediatric cohortUla Arkar Silan, Ana Trebše, Jernej Kovač, Mihael Rogač, Anja Troha Gergeli, Robert Šket, Tina Bregant, David Neubauer, Borut Peterlin, Damjan Osredkar, 2025, izvirni znanstveni članek Povzetek: Introduction: Cerebral palsy (CP) is a permanent movement or postural disorder due to non-progressive injury to the developing brain, with recent research suggesting a genetic contribution in many patients. This study aimed to investigate the genetic etiology of CP in Slovene children without a previously suspected genetic cause or with prior negative genetic testing. Methods: All children born after 2003 from the Slovenian National Registry of Cerebral Palsy (SRCP) without an established genetic diagnosis were invited to participate in this cross-sectional study. Whole exome sequencing (WES) was conducted, followed by analysis of 110 CP-associated genes. Thirteen patients underwent additional family segregation by Sanger sequencing. Genetic findings were classified according to the ACMG guidelines. Results: The study included 136 children, of whom 68 (50%) were male. Spastic CP was identified in 85% of the participants, dyskinetic in 13%, and ataxic in 2%. Gross Motor Function Classification System (GMFCS) levels varied, with the majority (36%) classified as level I. Pathogenic variants, likely pathogenic variants, or ‘de novo’ variants of unknown significance (VUS) were identified in nine children (6.6%) in ATL1, CTNNB1, DYRK1, KMT2A, PROC, SPAST, ZC4H2, and ZSWIM6. Among these nine children, two had normal brain Magnetic Resonance Imaging (MRI) and three had an unsuspicious medical history. Conclusion: This study identified plausible, possible, or definite genetic etiologies in a cohort of children with CP. Apart from the exclusion of individuals with a previously established genetic diagnosis, no other selection criteria were applied, allowing for an inclusive assessment of genetic contributions within this population. With the advent of personalized medicine and genetic treatment, understanding the genetic underpinnings of CP is crucial for targeted therapy. Ključne besede: cerebral palsy, genetic etiology, whole exome sequencing, gene therapy, CTNNB1 Objavljeno v DiRROS: 21.11.2025; Ogledov: 184; Prenosov: 74
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482. Variation of the clinical spectrum and genotype-phenotype associations in Coenzyme Q10 deficiency associated glomerulopathyStefania Drovandi, Beata Lipska-Zietkiewicz, Fatih Ozaltin, Francesco Emma, Bora Gülhan, Olivia Boyer, Agnes Trautmann, Szymon Ziętkiewicz, Tanja Kersnik-Levart, 2022, izvirni znanstveni članek Povzetek: PPrimary Coenzyme Q10 deficiency is a rare mitochondriopathy with a wide spectrum of organ involvement, including steroid-resistant nephrotic syndrome mainly associated with disease-causing variants in the genes COQ2, COQ6 or COQ8B. We performed a systematic literature review, PodoNet, mitoNET, and CCGKDD registries queries and an online survey, collecting comprehensive clinical and genetic data of 251 patients spanning 173 published (47 updated) and 78 new cases. Kidney disease was first diagnosed at median age 1.0, 1.2 and 9.8 years in individuals with disease-causing variants in COQ2, COQ6 and COQ8B, respectively. Isolated kidney involvement at diagnosis occurred in 34% of COQ2, 10.8% of COQ6 and 70.7% of COQ8B variant individuals. Classic infantile multiorgan involvement comprised 22% of the COQ2 variant cohort while 47% of them developed neurological symptoms at median age 2.7 years. The association of steroid-resistant nephrotic syndrome and sensorineural hearing loss was confirmed as the distinctive phenotype of COQ6 variants, with hearing impairment manifesting at average age three years. None of the patients with COQ8B variants, but 50% of patients with COQ2 and COQ6 variants progressed to kidney failure by age five. At adult age, kidney survival was equally poor (20-25%) across all disorders. A number of sequence variants, including putative local founder mutations, had divergent clinical presentations, in terms of onset age, kidney and non-kidney manifestations and kidney survival. Milder kidney phenotype was present in those with biallelic truncating variants within the COQ8B variant cohort. Thus, significant intra- and inter-familial phenotype variability was observed, suggesting both genetic and non-genetic modifiers of disease severity. Copyright (C) 2022, International Society of Nephrology. Ključne besede: coenzyme Q10, mitochondria, steroid-resistant nephrotic syndrome Objavljeno v DiRROS: 21.11.2025; Ogledov: 169; Prenosov: 88
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483. Oral Coenzyme Q10 supplementation leads to better preservation of kidney function in steroid-resistant nephrotic syndrome due to primary Coenzyme Q10 deficiencyStefania Drovandi, Beata Lipska-Zietkiewicz, Fatih Ozaltin, Francesco Emma, Bora Gülhan, Olivia Boyer, Agnes Trautmann, Hong Xu, Tanja Kersnik-Levart, 2022, izvirni znanstveni članek Povzetek: Primary Coenzyme Q10 (CoQ(10)) deficiency is an ultra-rare disorder caused by defects in genes involved in CoQ(10) biosynthesis leading to multidrug-resistant nephrotic syndrome as the hallmark kidney manifestation. Promising early results have been reported anecdotally with oral CoQ(10) supplementation. However, the long-term efficacy and optimal prescription remain to be established. In a global effort, we collected and analyzed information from 116 patients who received CoQ(10) supplements for primary CoQ(10) deficiency due to biallelic pathogenic variants in either the COQ2, COQ6 or COQ8B genes. Median duration of follow up on treatment was two years. The effect of treatment on proteinuria was assessed, and kidney survival was analyzed in 41 patients younger than 18 years with chronic kidney disease stage 1-4 at the start of treatment compared with that of an untreated cohort matched by genotype, age, kidney function, and proteinuria. CoQ(10) supplementation was associated with a substantial and significant sustained reduction of proteinuria by 88% at 12 months. Complete remission of proteinuria was more frequently observed in COQ6 disease. CoQ(10) supplementation led to significantly better preservation of kidney function (5-year kidney failure-free survival 62% vs. 19%) with an improvement in general condition and neurological manifestations. Side effects of treatment were uncommon and mild. Thus, our findings indicate that all patients diagnosed with primary CoQ(10) deficiency should receive early and life-long CoQ(10) supplementation to decelerate the progression of kidney disease and prevent further damage to other organs. Ključne besede: coenzyme Q10, deficiency, supplementation therapy, end-stage kidney disease, ESKD, genetic kidney disease, hereditary, kidney survival, outcome, proteinuria reduction Objavljeno v DiRROS: 21.11.2025; Ogledov: 168; Prenosov: 73
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484. Febrile illness in high-risk children : a prospective, international observational studyFabian Johannes Stanislaus Van der Velden, Gabriella De Vries, Alexander James Martin, Emma Lim, Ulrich Von Both, Laura Kolberg, Enitan D Carrol, Aakash Khanijau, Marko Pokorn, 2023, izvirni znanstveni članek Povzetek: To assess and describe the aetiology and management of febrile illness in children with primary or acquired immunodeficiency at high risk of serious bacterial infection, as seen in emergency departments in tertiary hospitals. Prospective data on demographics, presenting features, investigations, microbiology, management, and outcome of patients within the 'Biomarker Validation in HR patients' database in PERFORM, were analysed. Immunocompromised children (< 18 years old) presented to fifteen European hospitals in nine countries, and one Gambian hospital, with fever or suspected infection and clinical indication for blood investigations. Febrile episodes were assigned clinical phenotypes using the validated PERFORM algorithm. Logistic regression was used to assess the effect size of predictive features of proven/presumed bacterial or viral infection. A total of 599 episodes in 482 children were analysed. Seventy-eight episodes (13.0%) were definite bacterial, 67 episodes probable bacterial (11.2%), and 29 bacterial syndrome (4.8%). Fifty-five were definite viral (9.2%), 49 probable viral (8.2%), and 23 viral syndrome (3.8%). One hundred ninety were unknown bacterial or viral infections (31.7%), and 108 had inflammatory or other non-infectious causes of fever (18.1%). Predictive features of proven/presumed bacterial infection were ill appearance (OR 3.1 (95% CI 2.1-4.6)) and HIV (OR 10.4 (95% CI 2.0-54.4)). Ill appearance reduced the odds of having a proven/presumed viral infection (OR 0.5 ( 95% CI 0.3-0.9)). A total of 82.1% had new empirical antibiotics started on admission (N = 492); 94.3% proven/presumed bacterial (N = 164), 66.1% proven/presumed viral (N = 84), and 93.2% unknown bacterial or viral infections (N = 177). Mortality was 1.9% (N = 11) and 87.1% made full recovery (N = 522). Conclusion: The aetiology of febrile illness in immunocompromised children is diverse. In one-third of cases, no cause for the fever will be identified. Justification for standard intravenous antibiotic treatment for every febrile immunocompromised child is debatable, yet effective. Better clinical decision-making tools and new biomarkers are needed for this population. Ključne besede: immunocompromised, paediatric, children, fever, infection, antibiotics Objavljeno v DiRROS: 21.11.2025; Ogledov: 175; Prenosov: 77
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485. Podnebno poročilo o stanju v kmetijstvu : 2024Ajda Bleiweis, Jože Verbič, Maja Kožar, Tanja Travnikar, Viktor Jejčič, Borut Vrščaj, Janez Sušin, Tomaž Poje, Matej Bedrač, Ana Hiti Dvoršak, Vesna Telič, Anej Gerlušnik, Matej Ščuka, Boštjan Mali, Primož Simončič, Nina Rman, Dušan Rajver, 2025, slovar, enciklopedija, leksikon, priročnik, atlas, zemljevid Ključne besede: kmetijstvo, gozdarstvo, živilstvo, podnebje, podnebne spremembe, kmetijska politika, kmetijski podatki, Slovenija Objavljeno v DiRROS: 21.11.2025; Ogledov: 171; Prenosov: 97
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486. Transcriptomics‑based analysis of acetate and propionate transport and metabolism in Yarrowia lipolyticaMia Žganjar, David Sanz-Mata, Urška Hancman, Neža Čadež, Cene Gostinčar, Cristina Gonzales-Fernandez, Elia Tomás Pejó, Uroš Petrovič, 2025, izvirni znanstveni članek Povzetek: Background. Yarrowia lipolytica is a promising host for sustainable microbial oil production from waste-derived carboxylic acids such as acetate and propionate. Nonetheless, the molecular mechanisms underlying the metabolism and assimilation of these substrates, particularly under nitrogen limitation, are still not fully understood. Results. We conducted a multi-condition transcriptomic analysis of Y. lipolytica strain EXF-17398 under nitrogen-limiting conditions to investigate its transcriptional adaptation to acetate and propionate utilisation. Our results revealed distinct transcriptional responses associated with metabolic adaptation, including the coordinated regulation of Jen and Gpr carboxylate transporter families, suggesting a dual system for carboxylate uptake. JEN5 and GPR1 appear central to propionate and acetate utilisation, respectively. Our data suggest that propionate toxicity is mitigated through its conversion via the methylcitrate cycle and potentially the malonate semialdehyde pathway, preventing accumulation of cytotoxic propionyl-CoA in the cytosol. The upregulation of carnitine acyltransferases suggests active mitochondrial transport of acyl-CoAs, linking detoxification with energy metabolism. Under tested conditions, the de novo lipid synthesis was consistent with carbon overflow from acetyl-CoA and propionyl-CoA, supported by intracellular nitrogen recycling and redox balancing, independent of classical nitrogen regulatory pathways. Conclusions. These findings illustrate the capacity of Y. lipolytica to coordinate carbon and nitrogen metabolism during carboxylate utilisation, such as acetate and propionate, offering insights to guide the optimisation of microbial oil production from renewable feedstocks. Ključne besede: propionate, transport, metabolism Objavljeno v DiRROS: 21.11.2025; Ogledov: 178; Prenosov: 93
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487. Degree-balanced decompositions of cubic graphsBorut Lužar, Jakub Przybyło, Roman Soták, 2025, izvirni znanstveni članek Povzetek: We show that every cubic graph on ▫$n$▫ vertices contains a spanning subgraph, in which the number of vertices of each degree deviates from ▫$\frac{n}{4}$▫ by at most ▫$\frac{1}{2}$▫, up to three exceptions. This resolves the conjecture of Alon and Wei ({\em Irregular subgraphs, Combin. Probab. Comput. 32(2) (2023), 269--283}) for cubic graphs. Ključne besede: irregular subgraph, repeated degrees, degree-balanced decomposition Objavljeno v DiRROS: 21.11.2025; Ogledov: 159; Prenosov: 82
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488. Signed Quantum Graphs : a dynamical systemSovan Samanta, Tofigh Allahviranloo, Alireza Amirteimoori, Mohammad Hassan Behzadi, Leo Mršić, 2025, izvirni znanstveni članek Povzetek: Traditional Graphs, such as weighted graphs, or fuzzy graphs have static edge weights or membership values.These graphs have been widely used to model various complex systems, but they typically do not incorporate dynamicinteractions found in evolving systems like brain networks. Temporal graphs are data-based algorithmic time-dependentstructures. There is no such structure to represent the dynamic interactions of networks. Quantum graphs are structuredgraphs based on the dynamic behaviors of vertices and links. This study introduces Signed Quantum Graphs (SQGs) withtime-dependent signs that represent dynamical systems. The properties of SQGs have been investigated. Additionally,concepts and properties of triadic closure, balance, domination, and strength of a SQG have been studied. The area ofapplications in brain networks has been mentioned. We propose a dynamic signed graph framework, where edge signsevolve periodically using functions. Structural properties and convergence results are provided. Ključne besede: signed graphs, quantum graphs, dynamical networks, temporal graphs Objavljeno v DiRROS: 21.11.2025; Ogledov: 137; Prenosov: 58
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489. On 2-domination and 2-rainbow domination of cylindrical graphsJanez Žerovnik, 2025, izvirni znanstveni članek Povzetek: Cylindrical graphs and torus grid graphs are naturally constructed from subgraphs of the infinite grid by certain identifications of boundary vertices. Considering various domination type problems, it is usually possible to find an optimal solution on the infinite grid. To the contrary, exact values of invariants for the cylindrical and torus grid graphs are typically only known for special subfamilies, and are in general hard to compute. The 2-domination and 2-rainbow domination of cylindrical graphs is studied, and some new formulae and improved bounds are reported. We also consider weak 2-domination and singleton rainbow domination. Ključne besede: 2-domination, weak 2-domination, singleton 2-rainbow domination, cylindrical graphs, 2-dominacija, šibka 2-dominacija, singleton 2-mavrična dominacija, cilindrični grafi Objavljeno v DiRROS: 21.11.2025; Ogledov: 123; Prenosov: 57
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490. The 2-rainbow domination number of Cartesian bundles over cyclesSimon Brezovnik, Darja Rupnik Poklukar, Janez Žerovnik, 2025, izvirni znanstveni članek Povzetek: A k-rainbow dominating function (kRDF) of G assigns subsets of {1, 2, ..., k} to vertices, such that for vertex v with f(v) = ∅,Uu∈N(v)f(u) = {1, 2, ..., k}. The weight w(f) of kRDF f is w(f) = P v∈V(G)|f(v)|. The minimum weight of a kRDF of G is the k-rainbow domination number denoted by yrk(G). This paper focuses on the 2-rainbow domination number of Cartesian graph bundles of cycles over cycles, extending recent results for Cartesian product of cycles. Exact values are given for certain infinite families, and tight lower and upper bounds are established for general case. Ključne besede: 2-rainbow domination, domination numbers, graph bundles Objavljeno v DiRROS: 21.11.2025; Ogledov: 133; Prenosov: 77
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