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Naslov:A model species for agricultural pest genomics : the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)
Avtorji:ID Schoville, Sean D. (Avtor)
ID Chen, Yolanda H. (Avtor)
ID Andersson, Martin N. (Avtor)
ID Benoit, Joshua B. (Avtor)
ID Bhandari, Anita (Avtor)
ID Bowsher, Julia H. (Avtor)
ID Brevik, Kristian (Avtor)
ID Cappelle, Kaat (Avtor)
ID Chen, Mei-Ju M. (Avtor)
ID Childers, Anna K. (Avtor)
ID Gruden, Kristina (Avtor)
ID Petek, Marko (Avtor)
Datoteke:URL URL - Izvorni URL, za dostop obiščite HttP://dx.doi.org/10.1038/s41598-018-20154-1
 
.pdf PDF - Predstavitvena datoteka, prenos (2,58 MB)
MD5: 0851FF11D3603578C8F8B468FF660318
 
Jezik:Angleški jezik
Tipologija:1.01 - Izvirni znanstveni članek
Organizacija:Logo NIB - Nacionalni inštitut za biologijo
Povzetek:The Colorado potato beetle is one of the most challenging agricultural pests to manage. It has shown a spectacular ability to adapt to a variety of solanaceaeous plants and variable climates during its global invasion, and, notably, to rapidly evolve insecticide resistance. To examine evidence of rapid evolutionary change, and to understand the genetic basis of herbivory and insecticide resistance, we tested for structural and functional genomic changes relative to other arthropod species using genome sequencing, transcriptomics, and community annotation. Two factors that might facilitate rapid evolutionary change include transposable elements, which comprise at least 17% of the genome and are rapidly evolving compared to other Coleoptera, and high levels of nucleotide diversity in rapidly growing pest populations. Adaptations to plant feeding are evident in gene expansions and differential expression of digestive enzymes in gut tissues, as well as expansions of gustatory receptors for bitter tasting. Surprisingly, the suite of genes involved in insecticide resistance is similar to other beetles. Finally, duplications in the RNAi pathway might explain why Leptinotarsa decemlineata has high sensitivity to dsRNA. The L. decemlineata genome provides opportunities to investigate a broad range of phenotypes and to develop sustainable methods to control this widely successful pest.
Ključne besede:colorado potato beetle, genome
Status publikacije:Objavljeno
Verzija publikacije:Objavljena publikacija
Datum objave:31.01.2018
Leto izida:2018
Št. strani:str. 1-18
Številčenje:Vol. 8
PID:20.500.12556/DiRROS-19640 Novo okno
UDK:575.111
ISSN pri članku:2045-2322
DOI:10.1038/s41598-018-20154-1 Novo okno
COBISS.SI-ID:4626767 Novo okno
Opomba:Nasl. z nasl. zaslona; Opis vira z dne 26. 2. 2018;
Datum objave v DiRROS:24.07.2024
Število ogledov:289
Število prenosov:203
Metapodatki:XML DC-XML DC-RDF
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Gradivo je del revije

Naslov:Scientific reports
Skrajšan naslov:Sci. rep.
Založnik:Nature Publishing Group
ISSN:2045-2322
COBISS.SI-ID:18727432 Novo okno

Gradivo je financirano iz projekta

Financer:NIH - National Institutes of Health
Številka projekta:5R01GM080203-09
Naslov:Apollo: Collaborative, Interactive Analytics and Annotation of Genome Variants

Financer:NIH - National Institutes of Health
Številka projekta:5R01HG004483-09
Naslov:Enhancing the GMOD Suite of Genome Annotation and Visualization Tools

Financer:NIH - National Institutes of Health
Številka projekta:NHGRI U54 HG003273

Financer:Drugi - Drug financer ali več financerjev
Program financ.:UVM Agricultural Experiment Station Hatch
Številka projekta:VT-H02010
Naslov:Grant

Financer:NIH - National Institutes of Health
Številka projekta:K12 GM000708

Financer:NIH - National Institutes of Health
Program financ.:NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Številka projekta:5R01GM080203-12
Naslov:Apollo - Universal Infrastructure for Genome Curation

Financer:Drugi - Drug financer ali več financerjev
Program financ.:Office of Science, Office of Basic Energy Sciences, of the U.S. Department of Energy
Številka projekta:DE-AC02-05CH11231

Financer:Drugi - Drug financer ali več financerjev
Program financ.:National Science Centre
Številka projekta:2012/07/D/NZ2/04286

Licence

Licenca:CC BY 4.0, Creative Commons Priznanje avtorstva 4.0 Mednarodna
Povezava:http://creativecommons.org/licenses/by/4.0/deed.sl
Opis:To je standardna licenca Creative Commons, ki daje uporabnikom največ možnosti za nadaljnjo uporabo dela, pri čemer morajo navesti avtorja.

Sekundarni jezik

Jezik:Latinski jezik
Ključne besede:Leptinotarsa decemlineata


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