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Na voljo sta dva načina iskanja: enostavno in napredno. Enostavno iskanje lahko zajema niz več besed iz naslova, povzetka, ključnih besed, celotnega besedila in avtorja, zaenkrat pa ne omogoča uporabe operatorjev iskanja. Napredno iskanje omogoča omejevanje števila rezultatov iskanja z vnosom iskalnih pojmov različnih kategorij v iskalna okna in uporabo logičnih operatorjev (IN, ALI ter IN NE). V rezultatih iskanja se izpišejo krajši zapisi podatkov o gradivu, ki vsebujejo različne povezave, ki omogočajo vpogled v podroben opis gradiva (povezava iz naslova) ali sprožijo novo iskanje (po avtorjih ali ključnih besedah).

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1.
New alien Mediterranean biodiversity records (October 2020)
Michail Ragkousis, Nardjes Abdelali, Ernesto Azzurro, Ali Badreddine, Michel Bariche, Ghazi Bitar, Fabio Crocetta, Francesco Denitto, Ana Fortič, Borut Mavrič, 2020, izvirni znanstveni članek

Povzetek: This article includes 23 new records of alien and cryptogenic species in the Mediterranean Sea, belonging to 4 Phyla (Chordata, Echinodermata, Arthropoda and Mollusca), distributed from the Alboran to the Levantine Sea. Records are reported from eight countries listed from West to East as follows: Algeria: new records of the Atlantic blue crab Callinectes sapidus; Spain: further spread and establishment of the sea slug Lamprohaminoea ovalis in continental shores; Tunisia: first record of the Atlantic Blue Crab Callinectes sapidus in the Gulf of Gabes; Italy: a new occurrence of the pufferfish Lagocephalus sceleratus in Northern Ionian waters; first record of Cephalopholis taeniops in the Ionian Sea; first record of the redlip blenny, Ophioblennius atlanticus in the Ionian Sea; Slovenia: first record of the isopod Paranthura japonica in Slovenia; Greece: first record of the molluscs Eunaticina papilla, Plocamopherus ocellatus and the fish Cheilodipterus novemstriatus; first record of the ascidian Ecteinascidia turbinata in Kriti; the long-spined sea urchin Diadema setosum in the Ionian Sea; Turkey: first record of the sea spider Ammothea hilgendorfi; the stomatopod Cloridina cf. ichneumon; the fishes Pempheris rhomboidea from the Sea of Marmara and Paranthias furcifer from the Aegean Sea; Lebanon: new records of the fishes Arothron hispidus, Rachycentron canadum, Heniochus intermedius and Acanthurus monroviae; first record of Acanthostracion polygonius. The records of Cloridina cf. ichneumon from southern Turkey and the fish Acanthostracion polygonius from Lebanon, both being the first Mediterranean records, are noteworthy.
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 0
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2.
Minimum Information for Reporting on the Comet Assay (MIRCA) : recommendations for describing comet assay procedures and results
Peter Møller, Amaya Azqueta, Elisa Boutet-Robinet, Gudrun Koppen, Stefano Bonassi, Mirta Milić, Goran Gajski, Solange Costa, Bojana Žegura, Matjaž Novak, 2020, izvirni znanstveni članek

Povzetek: The comet assay is a widely used test for the detection of DNA damage and repair activity. However, there are interlaboratory differences in reported levels of baseline and induced damage in the same experimental systems. These differences may be attributed to protocol differences, although it is difficult to identify the relevant conditions because detailed comet assay procedures are not always published. Here, we present a Consensus Statement for the Minimum Information for Reporting Comet Assay (MIRCA) providing recommendations for describing comet assay conditions and results. These recommendations differentiate between ‘desirable’ and ‘essential’ information: ‘essential’ information refers to the precise details that are necessary to assess the quality of the experimental work, whereas ‘desirable’ information relates to technical issues that might be encountered when repeating the experiments. Adherence to MIRCA recommendations should ensure that comet assay results can be easily interpreted and independently verified by other researchers.
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 0
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3.
Heavy metals in the Adriatic-Ionian Seas : a case study to illustrate the challenges in data management when dealing with regional datasets
Maria-Eugenia Molina Jack, Rigers Bakiu, Ana Castelli, Branko Čermelj, Maja Fafanđel, Christina Georgopoulou, Giordano Giorgi, Athanassia Iona, Damir Ivankovic, Martina Kralj, Elena Partescano, Alice Rotini, Melita Velikonja, Marina Lipizer, 2020, izvirni znanstveni članek

Povzetek: Harmonization of monitoring protocols and analytical methods is a crucial issue for transnational marine environmental status assessment, yet not the only one. Coherent data management and quality control become very relevant when environmental status is assessed at regional or subregional scale (e.g., for the Mediterranean or the Adriatic Sea), thus requiring data from different sources. Heavy metals are among the main targets of monitoring activities. Significant efforts have been dedicated to share best practices for monitoring and assessment of ecosystem status and to strengthen the network of national, regional and European large data infrastructures in order to facilitate the access to data among countries. Data comparability and interoperability depend not only on sampling and analytical protocols but also on how data and metadata are managed, quality controlled and made accessible. Interoperability is guaranteed by using common metadata and data formats, and standard vocabularies to assure homogeneous syntax and semantics. Data management of contaminants is complex and challenging due to the high number of information required on sampling and analytical procedures, high heterogeneity in matrix characteristics, but also to the large and increasing number of pollutants. Procedures for quality control on heterogeneous datasets provided by multiple sources are not yet uniform and consolidated. Additional knowledge and reliable long time-series of data are needed to evaluate typical ranges of contaminant concentration. The analysis of a coherent and harmonized regional dataset can provide the basis for a multi-step quality control procedure, which can be further improved as knowledge increases during data validation process.
Ključne besede: contaminants, data management, harmonization, Adriatic Sea, Ionian Sea, pollution, assessment, heavy metals
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 0
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4.
Chocolate and risk of chronic disease : a systematic review and dose-response meta-analysis
Jakub Morze, Carolina Schwedhelm, Aleksander Benčič, Georg Hofmann, Heiner Boeing, Katarzyna Przybylowicz, Lukas Schwingshackl, 2020, izvirni znanstveni članek

Povzetek: Purpose Evidence for the association between chocolate intake and risk of chronic diseases is inconclusive. Therefore, we aimed to synthesize and evaluate the credibility of evidence on the dose-response association between chocolate consumption with risk of all-cause mortality, coronary heart disease (CHD), stroke, heart failure (HF), type 2 diabetes (T2D), colorectal cancer (CRC), and hypertension. Methods Prospective studies were searched until July 2018 in PubMed, Embase, and Web of Science. Random-effects meta-analyses comparing highest versus lowest intake categories, linear, and non-linear dose-response analyses were conducted. The credibility of evidence was evaluated with the NutriGrade scoring-system. Results Overall, 27 investigations were identified (n = 2 for all-cause mortality, n = 9 for CHD, n = 8 for stroke, n = 6 for HF, n = 6 for T2D, n = 2 for hypertension and CRC, respectively). No associations with HF (RR 0.99, 95% CI 0.94, 1.04) and T2D (RR 0.94, 95% CI 0.88, 1.01) per each 10 g/day increase in chocolate intake were observed in the linear dose-response meta-analyses. However, a small inverse association for each 10 g/daily increase could be shown for the risk of CHD (RR 0.96, 95% CI 0.93, 0.99), and stroke (RR 0.90, 95% CI 0.82, 0.98). The credibility of evidence was rated either very low (all-cause mortality, HF, T2D, CRC or hypertension) or low (CHD, stroke). Conclusion Chocolate consumption is not related to risk for several chronic diseases, but could have a small inverse association with CHD and stroke. Our findings are limited by very low or low credibility of evidence, highlighting important uncertainty for chocolate–disease associations.
Ključne besede: chocolate, meta-analysis, dose-response, credibility of evidence, chronic diseases
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 0
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5.
Microbial processing of jellyfish detritus in the ocean
Tinkara Tinta, Zihao Zhao, Alvaro Escobar, Katja Klun, Barbara Bayer, Chie Amano, Luca Bamonti, Gerhard J. Herndl, 2020, izvirni znanstveni članek

Povzetek: When jellyfish blooms decay, sinking jellyfish detrital organic matter (jelly-OM), rich in proteins and characterized by a low C:N ratio, becomes a significant source of OM for marine microorganisms. Yet, the key players and the process of microbial jelly-OM degradation and the consequences for marine ecosystems remain unclear. We simulated the scenario potentially experienced by the coastal pelagic microbiome after the decay of a bloom of the cosmopolitan Aurelia aurita s.l. We show that about half of the jelly-OM is instantly available as dissolved organic matter and thus, exclusively and readily accessible to microbes. During a typical decay of an A. aurita bloom in the northern Adriatic Sea about 100 mg of jelly-OM L–1 becomes available, about 44 μmol L–1 as dissolved organic carbon (DOC), 13 μmol L–1 as total dissolved nitrogen, 11 μmol L–1 of total hydrolyzable dissolved amino acids (THDAA) and 0.6 μmol L–1 PO43–. The labile jelly-OM was degraded within 1.5 days (>98% of proteins, ∼70% of THDAA, 97% of dissolved free amino acids and the entire jelly-DOC pool) by a consortium of Pseudoalteromonas, Alteromonas, and Vibrio. These bacteria accounted for >90% of all metabolically active jelly-OM degraders, exhibiting high bacterial growth efficiencies. This implies that a major fraction of the detrital jelly-OM is rapidly incorporated into biomass by opportunistic bacteria. Microbial processing of jelly-OM resulted in the accumulation of tryptophan, dissolved combined amino acids and inorganic nutrients, with possible implications for biogeochemical cycles.
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 0
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6.
COVID-19 pandemic consequences on coastal water quality using WST Sentinel-3 Data : case of Tangier, Morocco
El Khalil Cherif, Martin Vodopivec, Nezha Mejjad, Joaquim C.G Esteves da Silva, Simona Simonovič, Hakim Boulaassal, 2020, izvirni znanstveni članek

Povzetek: The west coast of Tangier, in northern Morocco, has been affected by industrial wastewater discharge that reaches the ocean through the Boukhalef river. Therefore, the Jbila and Sidikacem beaches near to the Boukhalef river mouth have been classified as polluted for many years. With the aim of determining the COVID-19 pandemic consequences on the Tangier coastal environment, a linear model using Sentinel 3 water surface temperature (WST) has been tested in several locations. Data from April 2019 and April 2020, before and during the COVID-19 pandemic related emergency status in Morocco, were compared. The results from April 2019 showed high WST values and consequently, the poorest water quality in the sites closest to the Boukhalef river mouth. On the other hand, the results from April 2020 showed normal WST values and high water quality in the same study area. These results illustrate the usefulness of Sentinel 3 WST for the estimation of bathing water quality on the west coast of Tangier. The study shows the positive impact of the COVID-19 pandemic consequences on the coastal environment quality in the study area and indicates the importance of decreasing the industrial discharge on the west coast of Tangier. The same methodology could be used in decision-making processes and to reduce cost, time and human resources for coastal monitoring systems. We demonstrate the potential of using the Sentinel 3 data for coastal waters monitoring, as well as the need for stricter controls of pollutant discharges into the world’s rivers.
Ključne besede: COVID-19, Sentinel 3, WST, Tangier west coast, coastal waters, bathing waters, industrial activities
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7.
Bisociative literature-based discovery : lessons learned and new word embedding approach
Nada Lavrač, Matej Martinc, Senja Pollak, Maruša Pompe Novak, Bojan Cestnik, 2020, izvirni znanstveni članek

Povzetek: The field of bisociative literature-based discovery aims at mining scientific literature to reveal yet uncovered connections between different fields of specialization. This paper outlines several outlier-based literature mining approaches to bridging term detection and the lessons learned from selected biomedical literature-based discovery applications. The paper addresses also new prospects in bisociative literature-based discovery, proposing an advanced embeddings-based technology for cross-domain literature mining.
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8.
Variation in plant leaf traits affects transmission and detectability of herbivore vibrational cues
Estefania Velilla, Jernej Polajnar, Meta Virant-Doberlet, Daniel Commandeur, Ralph Simon, Johannes H. C. Cornelissen, Jacintha Ellers, Wouter Halfwerk, 2020, izvirni znanstveni članek

Povzetek: Many insects use plant-borne vibrations to obtain important information about their environment, such as where to find a mate or a prey, or when to avoid a predator. Plant species can differ in the way they vibrate, possibly affecting the reliability of information, and ultimately the decisions that are made by animals based on this information. We examined whether the production, transmission, and possible perception of plant-borne vibrational cues is affected by variation in leaf traits. We recorded vibrations of 69 Spodoptera exigua caterpillars foraging on four plant species that differed widely in their leaf traits (cabbage, beetroot, sunflower, and corn). We carried out a transmission and an airborne noise absorption experiment to assess whether leaf traits influence amplitude and frequency characteristics, and background noise levels of vibrational chewing cues. Our results reveal that species-specific leaf traits can influence transmission and potentially perception of herbivore-induced chewing vibrations. Experimentally-induced vibrations attenuated stronger on plants with thicker leaves. Amplitude and frequency characteristics of chewing vibrations measured near a chewing caterpillar were, however, not affected by leaf traits. Furthermore, we found a significant effect of leaf area, water content and leaf thickness—important plant traits against herbivory, on the vibrations induced by airborne noise. On larger leaves higher amplitude vibrations were induced, whereas on thicker leaves containing more water airborne noise induced higher peak frequencies. Our findings indicate that variation in leaf traits can be important for the transmission and possibly detection of vibrational cues.
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 1
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9.
Arsenic in sediments, soil and plants in a remediated area of the Iron Quadrangle, Brazil, and its accumulation and biotransformation in Eleocharis geniculata
Maria-Angela Menezes, Ingrid Falnoga, Zdenka Šlejkovec, Radojko Jaćimović, Nilton Couto, Eleonora Deschamps, Jadran Faganeli, 2020, izvirni znanstveni članek

Povzetek: Since arsenic (As) exposure is largely due to geochemical contamination, this study focused on the remediated area of Santana do Morro, a district of Santa Bárbara, Minas Gerais, Brazil, which was previously contaminated with As due to gold mining. Total As concentrations in sediment, soil and plants were determined, next to As species, anionic arsenic compounds As(III), As(V), monomethylarsonic acid (MMA) and dimethylarsinic acid (DMA), in plants samples. Total As concentrations in soil and sediments were slightly elevated (16-18 µg g-1) and most of the plants contained low levels of As (< 1 µg g-1). The exception was a native plant Eleocharis geniculata (L.) which contained elevated levels of As (4 µg g-1). The exposure of this plant to As under controlled conditions (hydroponics) indicated its possible tolerance to elevated As levels and suggesting its potential use in phytomonitoring of As-contaminated sites. This plant is able to metabolize arsenate to arsenite and contained MMA and DMA, both in its natural habitat and under controlled conditions.
Ključne besede: arsenic species, soil, sediments, plants, Cyperacea, Iron Quadrangle
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 2
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10.
Challenges in harmonized assessment of heavy metals in the Adriatic and Ionian Seas
Daniela Berto, Margherita Malgorzata Formalewicz, Giordano Giorgi, Federico Rampazzo, Claudia Gion, Benedetta Trabucco, Michele Giani, Marina Lipizer, Slavica Matijević, Helen Kaberi, Christina Zeri, Oliver Bajt, Nevenka Mikac, Danijela Joksimović, Andriana Aravantinou, Mateja Poje, Magdalena Cara, Loredana Manfra, 2020, izvirni znanstveni članek

Povzetek: The Adriatic-Ionian region (ADRION Region) shows strong development in terms of urban expansion in coastal and inland areas as well as increasing maritime traffic and offshore hydrocarbon extraction activities. A serious risk of pollution arises from hazardous substances requiring reliable and coherent monitoring and assessment programs. EU Directives (WFD – Water Framework Directive, MSFD – Marine Strategy Framework Directive) and Barcelona Convention protocols, aim to assess the level of pollution with the objective to implement measures to prevent and/or mitigate impacts on the marine environment. This high level integration process has to be based on common and agreed protocols for monitoring of contaminants. Aiming to share best practices to encourage a harmonized implementation of monitoring and assessment of contaminants, an extensive review of monitoring and analytical protocols adopted by six EU and non-EU countries along the Adriatic and Ionian seas was carried out in the framework of the Interreg Adrion project HarmoNIA (Interreg V-B Adriatic-Ionian (ADRION), 2018–2020). This paper presents a methodological proposal to define a common protocol for the evaluation of the metal contamination of seawater, sediment and biota. Contaminants have been chosen following preliminary consultations among countries of the ADRION area, considering objectives of WFD and MSFD, as well as Environmental Impact Assessment (EIA) procedures for offshore platforms. Information was gathered relative to matrix characteristics and quality assurance/quality control of the analytical performance (sample preservation, analytical methodology, reference materials, limit of detection, and limit of quantification, accuracy, reproducibility, etc.). The comparison of information provided by laboratories of nine institutions highlighted the request for harmonization in terms of sampling procedures, matrix characterization, preservation procedures, analytical methods and LOQ values. Although appropriate environmental quality standards for biota and sediment matrices should be established at national level and also through regional and sub-regional cooperation, as required by the WFD and MSFD, the proposed LOQ values, even if challenging, represent a benchmark and a stimulus to optimize analytical performance, to ensure the best level of protection to the coastal and offshore environment in the ADRION Region.
Ključne besede: hazardous substances, harmonized protocols, integrated approach, monitoring, assessment of contaminants, heavy metals, Adriatic-Ionian Sea region
Objavljeno v DiRROS: 22.07.2024; Ogledov: 0; Prenosov: 2
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