1401. Informacije in napotki za bolnike, svojce in obiskovalce2025, slovar, enciklopedija, leksikon, priročnik, atlas, zemljevid Povzetek: V pričujoči knjižici smo na enem mestu združili vse pomembne informacije, ki naj bolnikom, pa tudi njihovim svojcem ali spremljevalcem, olajšajo prihod, gibanje in bivanje na inštitutu. Ključne besede: bolnišnice, pacienti, informacije Objavljeno v DiRROS: 07.08.2025; Ogledov: 351; Prenosov: 114
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1402. Information and guidance for patients, relatives, and visitors2025, slovar, enciklopedija, leksikon, priročnik, atlas, zemljevid Povzetek: In this booklet, we have gathered all the important information to make it easier for patients, as well as their relatives or companions, to arrive, move around, and stay at the Institute. Ključne besede: bolnišnice, pacienti, informacije Objavljeno v DiRROS: 07.08.2025; Ogledov: 401; Prenosov: 284
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1405. Timski pristop k zdravljenju raka glave in vratuPrimož Strojan, Cvetka Grašič-Kuhar, Branko Zakotnik, 2025, slovar, enciklopedija, leksikon, priročnik, atlas, zemljevid Ključne besede: timska obravnava, stranski učinki, bolniki, zdravstveni nasveti Objavljeno v DiRROS: 07.08.2025; Ogledov: 397; Prenosov: 140
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1407. D4.1 - Citizen Science PlaybookShé Mackenzie Hawke, Francesco Pilla, Irina Moira Cavaion, Cécil J. W. Meulenberg, 2025, končno poročilo o rezultatih raziskav Povzetek: The aimof this documentisto presentthe Engagement Strategy (ES)fortheCoastalCity Living Lab (CCLL) and citizen
science activities thatwas developedwithin WP4 (Task 4.1). Theseactivitieswere guided by theimpetus of the Paris
Agreement and by our Standard Ethical Protocol(SEP), defining theprivacy, principles and practice forparticipatory
engagement from citizens and other actors. This report also provides Learning Modules developed by WP4 to give
CCLL participants the opportunity to gain knowledge on climate adaptation and the SCORE project approaches
through description of basic knowledge and the key terminology used (provided as a glossary). The report further
provides an overview ofwebsitelinks, videos,webinars and courses with brief descriptions of variousresources and
tools to educate and instruct further how to set-up citizen science activities for climate-focused CCLLs.
The document’s whole content is dictated to empower CCLL stakeholders through transfer of basic knowledge on
climate change concepts as highlighted by the SCORE project. Therefore the Engagement Strategy and the Learning
Modules detailthe useof CCLLs, citizen science, do-it-yourself (DIY)sensortechnology, and participatory co-creation
and co-design activities, as well asthe EBA approach. It guides howto engage and motivatestakeholders and citizen
scientist participants using tools and resourses in the CCLL context, by activities executed in a series of capacity
building workshops, co-creation workshops, and citizen science and DIY sensor familiarisation workshops.
Familiarisation to principal climate change knowledgeis needed to direct, engage andmotivateparticipants. Coastal
flooding and erosion, extreme weather events and associated changesin precipitation, are themoststriking aspects
of climate change related to coastal cities, alongwith ocean rise in volumeand temperature. SCOREaddressed those
issues alongwith their impacts, and included thosechallenges within its framework according to each CCLL primary
challenges. The engagement task provided this background information, with the learning modules and tools
documented in this report addressing these issues in a more comprehensive fashion.
Participatory engagement is a vital aspect of any Living Lab project. SCORE applied an inclusive participatory
engagement methodology, that involved the recruitment of a range of voluntary participants or citizen scientists,
primarily adults, who come from a variety of classes, gender, ethnic, religious and cultural backgrounds, as well as
from industry and business, academia, general public and governance. Participants were recruited through public
surveys,social media platforms and standardmulti-media platformssuch as notice boards and newspapers, as well
as through community networks and publicmeetings, and participated in a series of ‘howto’ CCLL capacity building
and co-creation workshops, as well as citizen science and DIY sensor familiarisation workshops throughout the
project.
As this document will be publicly available after the completion of the project, its orderly representation of the
project illustrating consistentinteraction with project partners and with external CCLL stakeholders,will be a guide
on how to engage stakeholders in citizen science initiatives and can build a CCLL with a climate adaptation focus. Objavljeno v DiRROS: 07.08.2025; Ogledov: 386; Prenosov: 214
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1409. A comprehensive guide to potato transcriptome assemblyMaja Zagorščak, Marko Petek, 2021, samostojni znanstveni sestavek ali poglavje v monografski publikaciji Povzetek: We have witnessed a rapid advancement in high-throughput genome sequencing and the maturation of long-read technologies. However, an accurate assembly of polyploid potato genomes still remains challenging. Sequencing the double-monoploid genome of Solanum tuberosum Group Phureja (Xu et al., Nature 475:189–195, 2011) has enabled functional studies of polyploid potato cultivars using RNA sequencing (RNA-Seq) technologies, although with the limitation of not covering cultivar-specific gene expression. The accumulated RNA-Seq datasets from these cultivars can be leveraged to assemble tetraploid potato transcriptomes that enable the analysis of genes that are not limited to reference genome annotations. To increase transcriptomes’ quality, short-read assemblies are nowadays complemented with full-length transcriptome sequencing using Pacific Biosciences or Oxford Nanopore platforms. In this chapter we give a detailed guide on a pipeline for de novo transcriptome assembly of polyploid potato genotypes and their integration into a pan-transcriptome. Objavljeno v DiRROS: 06.08.2025; Ogledov: 365; Prenosov: 220
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1410. Methodologies for discovery and quantitative profiling of sRNAs in potatoMaja Križnik, Maja Zagorščak, Kristina Gruden, 2021, samostojni znanstveni sestavek ali poglavje v monografski publikaciji Povzetek: Small RNAs (sRNAs) are short noncoding RNAs involved in the regulation of a wide range of biological processes in plants. Advances in high-throughput sequencing and development of new computational tools had facilitated the discovery of different classes of sRNAs, their quantification, and elucidation of their functional role in gene expression regulation by target transcript predictions. The workflow presented here allows identification of different sRNA species: known and novel potato miRNAs, and their sequence variants (isomiRs), as well as identification of phased small interfering RNAs (phasiRNAs). Moreover, it includes steps for differential expression analysis to search for regulated sRNAs across different tested biological conditions. In addition, it describes two different methods for predicting sRNA targets, in silico prediction, and degradome sequencing data analysis. All steps of the workflow are written in a clear and user-friendly way; thus they can be followed also by the users with minimal bioinformatics knowledge. We also included several in-house scripts together with valuable notes to facilitate data (pre)processing steps and to reduce the analysis time. Objavljeno v DiRROS: 06.08.2025; Ogledov: 410; Prenosov: 195
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