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Title:Adipose tissue transcriptome profiles of local Krškopolje pig and modern hybrids receiving reduced protein diets
Authors:ID Poklukar Žnidaršič, Klavdija (Author)
ID Čandek-Potokar, Marjeta (Author)
ID Savić, Bojana (Author)
ID Škrlep, Martin (Author)
Files:URL URL - Source URL, visit https://www.sciencedirect.com/science/article/pii/S1751731126001114
 
.pdf PDF - Presentation file, download (1,54 MB)
MD5: D55F58ED2AB9FE3846278F6D94267415
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo KIS - Agricultural Institute of Slovenia
Abstract:Compared to lean pig genotypes, the local Krškopolje pig is characterized by a greater capacity for lipid and lower capacity for protein deposition, along with lower dietary protein requirements. The aim of the present study was to unravel the transcriptomic differences in subcutaneous adipose tissue between the local Krškopolje pig and modern hybrids, as well as to study the impact of the reduced protein diet in both genotypes. Differential gene expression analysis between local and modern pigs revealed 375 differentially expressed genes, with 189 upregulated and 186 downregulated in Krškopolje pig. Among the upregulated genes, several suggested more pronounced adipogenesis (SLC7A10, ADIRF, INHBB, and SFRP2) in the Krškopolje pig. In addition, genes encoding collagen proteins and extracellular matrix remodeling (e.g., COL6A5, COL4A5, COL2A1), calcium signalling (TRPV4, CAMK2A, CALML5), pro-inflammatory cytokines (e.g., IL1A, TNFSF9, CXCL8, PTGS2 etc.) and cholesterol metabolism (CYP1A1, CYP2A19, CES1 etc.) were differentially expressed. The reduced protein diet induced only minor changes in gene expression at the individual gene level. However, gene set enrichment analysis revealed that, in Krškopolje pigs, dietary effects were associated with biological processes related to immune response, intracellular protein transport, and extracellular matrix organization. In the case of modern hybrids, reduced protein diet resulted in enrichment of gene sets related to oxidative phosphorylation, mitochondrial function, and energy metabolism. In conclusion, this study demonstrated that the adipose tissue of Krškopolje pigs compared with modern hybrids exhibited greater adipogenic potential, being also supported by higher expression of genes involved in extracellular matrix remodelling and inflammation. The impact of reduced protein diet on adipose-tissue gene expression was relatively small in both breeds, particularly in Krškopolje pig, suggesting a metabolic adaptability of this breed.
Keywords:gene expression, breed comparison, low protein dietadipogenesisimmune response, adipogenesis, immune response
Publication status:Published
Publication version:Preprint, working version of publication, not peer-reviewed
Publication date:27.05.2026
Year of publishing:2026
Number of pages:str.
Numbering:Vol. 18, iss. 2, [articlo no.] 101864
PID:20.500.12556/DiRROS-29600 New window
UDC:636.4
ISSN on article:1751-732X
DOI:10.1016/j.animal.2026.101864 New window
COBISS.SI-ID:279939843 New window
Note:Nasl. z nasl. zaslona; Soavtorji: M. Čandek-Potokar, B. Savić, M. Škrlep; Opis vira z dne 1. 6. 2026;
Publication date in DiRROS:01.06.2026
Views:114
Downloads:91
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Record is a part of a journal

Title:Animal : the international journal of animal biosciences
Publisher:Elsevier BV
ISSN:1751-732X
COBISS.SI-ID:2032008 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J4-3094-2021
Name:Identifikacija genetskih in metabolnih lastnosti mastnih pasem prašičev - primer krškopoljskega prašiča

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:Z4-60178-2025
Name:Genomski pristop za rejo na izboljšano kakovost mesa pri lokalni pasmi krškopoljskega prašiča

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P4-0133-2018
Name:Trajnostno kmetijstvo

Funder:EC - European Commission
Project number:101000236
Name:GEroNIMO: Genome and Epigenome eNabled breedIng in MOnogastrics
Acronym:GEroNIMO

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

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