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Title:Environmental DNA Metabarcoding of Cephalopod Diversity in the Tyrrhenian Deep Sea : version v 1.0
Authors:ID La Torre, Martina (Author)
ID Cussigh, Alex (Author)
ID Crobe, Valentina (Author)
ID Spiga, Martina (Author)
ID Ferrari, Alice (Author)
ID Cariani, Alessia (Author)
ID Piattoni, Federica (Author)
ID Costantini, Federica (Author)
ID Franzellitti, Silvia (Author)
ID Pallavicini, Alberto (Author)
ID Stanković, David (Author)
ID Stefanni, Sergio (Author)
Files:URL URL - Source URL, visit https://zenodo.org/records/13759423
 
.zip ZIP - Research data, download (11,19 MB)
MD5: 866856EAB40357987ECA113BF3AC7787
 
.json JSON - Metadata, download (8,27 KB)
MD5: 61C8C638B4C154DD5B7C4F8CDD5AACB5
 
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Language:English
Typology:2.20 - Complete scientific database of research data
Organization:Logo NIB - National Institute of Biology
Abstract:This dataset contains the raw demultiplexed reads of the study "Environmental Metabarcoding of Cephalopod Diversity in the Tyrrhenian Deep Sea". eDNA was extracted from water (wat) and sediment (sed) matrices, amplified with Ceph18S primers that specifically target cephalopods (de Jonge et al. 2021), and sequenced on IonTorrent platform. The names of the files indicate the sampling station (ST1, ST4, ST5, ST6), the replicate number (R1, R2), and the environmental matrix (wat, sed).
Keywords:eDNA metabarcoding, cephalopod assemblages, deep-sea biodiversity, Dohrn canyo, environmental matrices, reference databases, Tyrrhenian deep sea, Mediterranean deep sea
Publication status:Published
Publication version:Version of Record
Publication date:30.03.2025
Place of publishing:Genève
Publisher:Zenodo
Year of publishing:2025
Number of pages:1 spletni vir
PID:20.500.12556/DiRROS-29330 New window
UDC:574.5
COBISS.SI-ID:274268931 New window
Note:Nasl. z. nasl. zaslona; Opis vira z dne 5. 4. 2026; Soavtorji: Alex Cussigh, Valentina Crobe, Martina Spiga, Alice Ferrari, Alessia Cariani, Federica Piattoni, Federica Costantini, Silvia Franzellitti, Alberto Pallavicini, David Stanković, and Sergio Stefanni;
Publication date in DiRROS:08.05.2026
Views:24
Downloads:16
Metadata:XML DC-XML DC-RDF
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Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:okoljska DNK, eDNK metabarkodiranje, glavonožci, morska biologija, globokomorski kanjoni, okoljske matrice, referenčne baze podatkov, Tirensko globoko morje, Sredozemsko globoko morje


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This document is a part of these collections:
  1. Environmental DNA metabarcoding of cephalopod diversity in the Tyrrhenian deep sea

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