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Title:A mini-TGA protein modulates gene expression through heterogeneous association with transcription factors
Authors:ID Tomaž, Špela (Author)
ID Petek, Marko (Author)
ID Lukan, Tjaša (Author)
ID Pogačar, Karmen (Author)
ID Stare, Katja (Author)
ID Teixeira Prates, Erica (Author)
ID Jacobson, Daniel A. (Author)
ID Zrimec, Jan (Author)
ID Bajc, Gregor (Author)
ID Butala, Matej (Author)
ID Pompe Novak, Maruša (Author)
ID Taler-Verčič, Ajda (Author)
ID Usenik, Aleksandra (Author)
ID Turk, Dušan (Author)
ID Coll Rius, Anna (Author)
ID Gruden, Kristina (Author)
Files:URL URL - Source URL, visit https://doi.org/10.1093/plphys/kiac579
 
.pdf PDF - Presentation file, download (1,37 MB)
MD5: 7E5CE539ECE1AFFC607A26125B8999D4
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:TGA (TGACG-binding) transcription factors, which bind their target DNA through a conserved basic region leucine zipper (bZIP) domain, are vital regulators of gene expression in salicylic acid (SA)-mediated plant immunity. Here, we investigated the role of StTGA2.1, a potato (Solanum tuberosum) TGA lacking the full bZIP, which we named a mini-TGA. Such truncated proteins have been widely assigned as loss-of-function mutants. We, however, confirmed that StTGA2.1 overexpression compensates for SA-deficiency, indicating a distinct mechanism of action compared with model plant species. To understand the underlying mechanisms, we showed that StTGA2.1 can physically interact with StTGA2.2 and StTGA2.3, while its interaction with DNA was not detected. We investigated the changes in transcriptional regulation due to StTGA2.1 overexpression, identifying direct and indirect target genes. Using in planta transactivation assays, we confirmed that StTGA2.1 interacts with StTGA2.3 to activate StPRX07, a member of class III peroxidases (StPRX), which are known to play role in immune response. Finally, via structural modeling and molecular dynamics simulations, we hypothesized that the compact molecular architecture of StTGA2.1 distorts DNA conformation upon heterodimer binding to enable transcriptional activation. This study demonstrates how protein truncation can lead to distinct functions and that such events should be studied carefully in other protein families.
Publication status:Published
Publication version:Version of Record
Publication date:01.03.2023
Year of publishing:2022
Number of pages:str. 1934–1952
Numbering:Vol. 191, iss. 3
PID:20.500.12556/DiRROS-19501 New window
UDC:578
ISSN on article:0032-0889
DOI:10.1093/plphys/kiac579 New window
COBISS.SI-ID:135092739 New window
Note:Ostali avtorji: Marko Petek, Tjaša Lukan, Karmen Pogačar, Katja Stare, Erica Teixeira Prates, Daniel A Jacobson, Jan Zrimec, Gregor Bajc, Matej Butala, Maruša Pompe Novak, Quentin Dudley, Nicola Patron, Ajda Taler-Verčič, Aleksandra Usenik, Dušan Turk, Salomé Prat, Anna Coll, Kristina Gruden;
Publication date in DiRROS:18.07.2024
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Record is a part of a journal

Title:Plant physiology
Shortened title:Plant physiol.
Publisher:American Society of Plant Physiologists
ISSN:0032-0889
COBISS.SI-ID:5661703 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P4-0165
Name:Biotehnologija in sistemska biologija rastlin

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J4-1777
Name:Odkrivanje mehanizmov učinkovitosti in specifičnosti imunske signalizacije v krompirju z inovativnim pridobivanjem podatkov in modeliranjem

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-2467
Name:Odkrivanje dinamike omrežja v interakciji krompirjev virus Y-rastlinska celica

Funder:EC - European Commission
Funding programme:H2020
Project number:862858
Name:Accelerated Development of multiple-stress tolerAnt PoTato
Acronym:ADAPT

Funder:Other - Other funder or multiple funders
Funding programme:Plant-Microbe Interfaces (PMI) Scientific Focus Area in the Genomic Sciences Program

Funder:Other - Other funder or multiple funders
Funding programme:US Department of Energy
Project number:DE-AC05-00OR22725

Secondary language

Language:Slovenian
Keywords:proteini mini-TGA, rastlinski imunski odziv, transkripcijski faktorji TGA, virus krompirja Y


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