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Title:Large-scale exome analyses reveal new rare variant contributions in amyotrophic lateral sclerosis
Authors:ID Hop, Paul J. (Author)
ID Rogelj, Boris (Author)
ID Koritnik, Blaž (Author)
ID Zidar, Janez (Author)
ID Veldink, Jan H. (Author), et al.
Files:.pdf PDF - Presentation file, download (22,71 MB)
MD5: 292783084A594D3619C3EDABEC19C02E
 
URL URL - Source URL, visit https://www.nature.com/articles/s41588-026-02535-9
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo UKC LJ - Ljubljana University Medical Centre
Abstract:Amyotrophic lateral sclerosis (ALS) is a heritable disorder where rare variants with low-to-moderate penetrance are thought to dominate genetic risk. To identify such rare variants, we harmonized and analyzed exome data from 22 cohorts, totaling 17,919 individuals with ALS and 200,703 controls across discovery and replication phases. Rare variant analyses identified several new risk genes, with replication confirming association of YKT6 and supporting HTR3C, GBGT1 and KNTC1. We also provide strong, independent validation for genes with limited previous evidence: ARPP21, DNAJC7 and CFAP410. Notably, in ARPP21, we identified a new high-effect variant (p.P747L) and confirmed that p.P563L is an ALS-associated variant leading to an aggressive disease course. Beyond new discoveries, our analyses largely recapitulated the known genetic architecture of ALS, identifying risk variants in over 20% of cases and supporting a cumulative oligogenic risk model. These findings highlight new translational targets and show that rare variant analyses capture substantially more genetic risk than common variant genome-wide association studies.
Keywords:genetics, neuroscience, rare variant analysis, amyotrophic lateral sclerosis (ALS), genetic risk factors
Publication status:Published
Publication version:Version of Record
Year of publishing:2026
Number of pages:str. 717-725
Numbering:Vol. 58
PID:20.500.12556/DiRROS-29215 New window
UDC:575
ISSN on article:1546-1718
DOI:10.1038/s41588-026-02535-9 New window
COBISS.SI-ID:274741251 New window
Note:Nasl. z nasl. zaslona; Opis vira z dne 9. 4. 2026;
Publication date in DiRROS:24.04.2026
Views:30
Downloads:15
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Record is a part of a journal

Title:Nature genetics
Shortened title:Nat Genet
Publisher:Nature America, Inc.
ISSN:1546-1718
COBISS.SI-ID:2928404 New window

Document is financed by a project

Funder:EC - European Commission
Project number:772376
Name:Emerging Simplex ORigins In ALS
Acronym:EScORIAL

Funder:SFI - Science Foundation Ireland
Project number:21/RC/10294_P2
Name:FutureNeuro_Phase2

Funder:UKRI - UK Research and Innovation
Project number:MR/Z505705/1
Name:Validating ALS Molecular Subtypes For Diagnostics And Disease Stratification

Funder:NIH - National Institutes of Health
Project number:1ZIAAG000933-09
Name:Genetic etiology of Amyotrophic Lateral Sclerosis

Funder:Other - Other funder or multiple funders

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:analiza redkih variant, amiotrofična lateralna skleroza, genetski dejavniki tveganja


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