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Title:Transcriptomic approach in understanding Fabry nephropathy : a review of the literature and proof-of-concept
Authors:ID Breznik, Nika (Author)
ID Levstek, Tina (Author)
ID Vujkovac, Bojan (Author)
ID Cokan Vujkovac, Andreja (Author)
ID Trebušak Podkrajšek, Katarina (Author)
Files:.pdf PDF - Presentation file, download (922,72 KB)
MD5: B0D18EBC48A49B26C4A0C5181ADFF872
 
URL URL - Source URL, visit https://www.mdpi.com/2073-4425/16/5/601
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo UKC LJ - Ljubljana University Medical Centre
Abstract:Background/Objectives: Fabry nephropathy (FN) is a progressive complication of Fabry disease that significantly affects patient outcomes. However, the molecular mechanisms underlying FN are not yet fully understood. Recent advances in transcriptomics have opened new perspectives for the identification of early changes in gene expression associated with the development and progression of the disease. Methods: This study includes a systematic review of transcriptomic findings in chronic kidney disease, with a particular focus on FN, and presents a proof-of-concept RNA sequencing analysis of peripheral blood samples from six Fabry patients with progressive nephropathy and six age- and sex-matched control subjects. Results: The analysis identified 41 differentially expressed genes (DEGs), all of which were upregulated in Fabry patients. Enrichment analysis revealed significant involvement in immune-related pathways, including neutrophil degranulation, interferon, and cytokine signaling. Cell type enrichment revealed that neutrophils and other immune cells are key players in this process. Conclusions: These results suggest that immune and inflammatory mechanisms play a central role in the pathogenesis of FN. The identified DEGs are involved in pro-fibrotic signaling and immune system activation and shed light on possible mechanisms underlying fibrosis, podocyte injury, and kidney damage. This study contributes to a deeper understanding of FN and may faci
Keywords:Fabry nephropathy, RNA sequencing, transcriptomic, Fabry disease, lysosomal storage disease
Publication status:Published
Publication version:Version of Record
Year of publishing:2025
Number of pages:1-13 str.
Numbering:Vol. 16, iss. 5, [article no.] 601
PID:20.500.12556/DiRROS-28935 New window
UDC:577.2
ISSN on article:2073-4425
DOI:10.3390/genes16050601 New window
COBISS.SI-ID:237502467 New window
Note:Nasl. z nasl. zaslona; Opis vira z dne 28. 5. 2025;
Publication date in DiRROS:14.04.2026
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Downloads:63
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Record is a part of a journal

Title:Genes
Shortened title:Genes
Publisher:Multidisciplinary Digital Publishing Institute (MDPI)
ISSN:2073-4425
COBISS.SI-ID:523100185 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0170-2018
Name:Molekulski mehanizmi uravnavanja celičnih procesov v povezavi z nekaterimi boleznimi pri človeku

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J3-50113-2023
Name:Prepoznavanje in longitudinalna opredelitev bioloških označevalcev razvoja in napredovanja nefropatije pri Fabryjevi bolezni

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:Fabryjeva nefropatija, sekvenciranje RNA, transkriptomika, Fabryjeva bolezen, bolezen lizosomskega kopičenja


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