Digital repository of Slovenian research organisations

Show document
A+ | A- | Help | SLO | ENG

Title:Cryo-EM structures of a protein pore reveal a cluster of cholesterol molecules and diverse roles of membrane lipids
Authors:ID Šolinc, Gašper (Author)
ID Srnko, Marija (Author)
ID Merzel, Franci (Author)
ID Crnković, Ana (Author)
ID Kozorog, Mirijam (Author)
ID Podobnik, Marjetka (Author)
ID Anderluh, Gregor (Author)
Files:URL URL - Source URL, visit https://www.nature.com/articles/s41467-025-58334-z
 
.pdf PDF - Presentation file, download (2,01 MB)
MD5: 65BE545EF338BB88EFEF724C22D8570C
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo KI - National Institute of Chemistry
Abstract:The structure and function of membrane proteins depend on their interactions with lipids that constitute membranes. Actinoporins are α-pore-forming proteins that bind preferentially to sphingomyelin-containing membranes, where they oligomerize and form transmembrane pores. Through a comprehensive cryo-electron microscopic analysis of a pore formed by an actinoporin Fav from the coral Orbicella faveolata, we show that the octameric pore interacts with 112 lipids in the upper leaflet of the membrane, reveal the roles of lipids, and demonstrate that the actinoporin surface is suited for binding multiple receptor sphingomyelin molecules. When cholesterol is present in the membrane, it forms a cluster of four molecules associated with each protomer. Atomistic simulations support the structural data and reveal additional effects of the pore on the lipid membrane. These data reveal a complex network of protein-lipid and lipid-lipid interactions and an underrated role of lipids in the structure and function of transmembrane protein complexes.
Publication status:Published
Publication version:Version of Record
Publication date:01.01.2025
Year of publishing:2025
Number of pages:str. 1-11
Numbering:Vol. 16, article no. 2972
PID:20.500.12556/DiRROS-22223 New window
UDC:577
ISSN on article:2041-1723
DOI:10.1038/s41467-025-58334-z New window
COBISS.SI-ID:235400707 New window
Copyright:© The Author(s) 2025
Note:Nasl. z nasl. zaslona; Opis vira z dne 9. 5. 2025;
Publication date in DiRROS:12.05.2025
Views:621
Downloads:317
Metadata:XML DC-XML DC-RDF
:
Copy citation
  
Share:Bookmark and Share


Hover the mouse pointer over a document title to show the abstract or click on the title to get all document metadata.

Record is a part of a journal

Title:Nature communications
Shortened title:Nat. Commun.
Publisher:Nature Publishing Group
ISSN:2041-1723
COBISS.SI-ID:2315876 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0391
Name:Molekulske interakcije

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J4-8225
Name:Nove nanopore za aplikacije senzorike

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J4-2547
Name:DETEKCIJA PROTEINOV Z NANOPORAMI

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:I0-0003
Name:Infrastrukturna dejavnost KI

Funder:HPC RIVR consortium and EuroHPC JU

Funder:EC - European Commission
Funding programme:H2020
Project number:896849
Name:Towards nanopore proteomics: enhancing cytolysin performance through genetically encoded noncanonical amino acids
Acronym:nanoEx

Licences

License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
Description:The most restrictive Creative Commons license. This only allows people to download and share the work for no commercial gain and for no other purposes.
Licensing start date:26.03.2025
Applies to:Text and Data Mining valid from 2025-03-26 Version of Record valid from 2025-03-26

Secondary language

Language:Slovenian
Keywords:biokemija, lipidi, beljakovine, membrane, mikroskopske analize


Back