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Title:A model species for agricultural pest genomics : the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)
Authors:ID Schoville, Sean D. (Author)
ID Chen, Yolanda H. (Author)
ID Andersson, Martin N. (Author)
ID Benoit, Joshua B. (Author)
ID Bhandari, Anita (Author)
ID Bowsher, Julia H. (Author)
ID Brevik, Kristian (Author)
ID Cappelle, Kaat (Author)
ID Chen, Mei-Ju M. (Author)
ID Childers, Anna K. (Author)
ID Gruden, Kristina (Author)
ID Petek, Marko (Author)
Files:URL URL - Source URL, visit HttP://dx.doi.org/10.1038/s41598-018-20154-1
 
.pdf PDF - Presentation file, download (2,58 MB)
MD5: 0851FF11D3603578C8F8B468FF660318
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:The Colorado potato beetle is one of the most challenging agricultural pests to manage. It has shown a spectacular ability to adapt to a variety of solanaceaeous plants and variable climates during its global invasion, and, notably, to rapidly evolve insecticide resistance. To examine evidence of rapid evolutionary change, and to understand the genetic basis of herbivory and insecticide resistance, we tested for structural and functional genomic changes relative to other arthropod species using genome sequencing, transcriptomics, and community annotation. Two factors that might facilitate rapid evolutionary change include transposable elements, which comprise at least 17% of the genome and are rapidly evolving compared to other Coleoptera, and high levels of nucleotide diversity in rapidly growing pest populations. Adaptations to plant feeding are evident in gene expansions and differential expression of digestive enzymes in gut tissues, as well as expansions of gustatory receptors for bitter tasting. Surprisingly, the suite of genes involved in insecticide resistance is similar to other beetles. Finally, duplications in the RNAi pathway might explain why Leptinotarsa decemlineata has high sensitivity to dsRNA. The L. decemlineata genome provides opportunities to investigate a broad range of phenotypes and to develop sustainable methods to control this widely successful pest.
Keywords:colorado potato beetle, genome
Publication status:Published
Publication version:Version of Record
Publication date:31.01.2018
Year of publishing:2018
Number of pages:str. 1-18
Numbering:Vol. 8
PID:20.500.12556/DiRROS-19640 New window
UDC:575.111
ISSN on article:2045-2322
DOI:10.1038/s41598-018-20154-1 New window
COBISS.SI-ID:4626767 New window
Note:Nasl. z nasl. zaslona; Opis vira z dne 26. 2. 2018;
Publication date in DiRROS:24.07.2024
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Downloads:0
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Record is a part of a journal

Title:Scientific reports
Shortened title:Sci. rep.
Publisher:Nature Publishing Group
ISSN:2045-2322
COBISS.SI-ID:18727432 New window

Document is financed by a project

Funder:NIH - National Institutes of Health
Project number:5R01GM080203-09
Name:Apollo: Collaborative, Interactive Analytics and Annotation of Genome Variants

Funder:NIH - National Institutes of Health
Project number:5R01HG004483-09
Name:Enhancing the GMOD Suite of Genome Annotation and Visualization Tools

Funder:NIH - National Institutes of Health
Project number:NHGRI U54 HG003273

Funder:Other - Other funder or multiple funders
Funding programme:UVM Agricultural Experiment Station Hatch
Project number:VT-H02010
Name:Grant

Funder:NIH - National Institutes of Health
Project number:K12 GM000708

Funder:NIH - National Institutes of Health
Funding programme:NATIONAL INSTITUTE OF GENERAL MEDICAL SCIENCES
Project number:5R01GM080203-12
Name:Apollo - Universal Infrastructure for Genome Curation

Funder:Other - Other funder or multiple funders
Funding programme:Office of Science, Office of Basic Energy Sciences, of the U.S. Department of Energy
Project number:DE-AC02-05CH11231

Funder:Other - Other funder or multiple funders
Funding programme:National Science Centre
Project number:2012/07/D/NZ2/04286

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Latin
Keywords:Leptinotarsa decemlineata


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