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Title:Detection of the endangered stone crayfish Austropotamobius torrentium (Schrank, 1803) and its congeneric A. pallipes in its last italian biotope by eDNA analysis
Authors:ID Manfrin, Chiara (Author)
ID Zanetti, Massimo (Author)
ID Stanković, David (Author)
ID Fattori, Umberto (Author)
ID Bertucci-Maresca, Victoria (Author)
ID Giulianini, Piero G. (Author)
ID Pallavicini, Alberto (Author)
Files:URL URL - Source URL, visit https://www.mdpi.com/1424-2818/14/3/205
 
.pdf PDF - Presentation file, download (18,75 MB)
MD5: 23323FB858E3A23015E191E2F519C0D1
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:The stone crayfish, Austropotamobius torrentium, is a European freshwater crayfish. Although this species is relatively widespread throughout the continent, it is undergoing significant declines throughout its range. However, as the decline rates have not been quantified in detail, this species is classified as data deficient by the IUCN Red List of Threatened Species. The present study describes the development and validation of two species-specific assays based on hydrolysis probe chemistry for the detection of A. torrentium and A. pallipes environmental DNA (eDNA) in water samples collected in the Julian Alps of Italy (Friuli Venezia Giulia). The eDNA-based method was applied to 14 sites within the Danubian Slizza basin, known to be inhabited by A. torrentium, but with insufficient information on their distribution. In addition, one station in the Tagliamento River basin was sampled to test the performance of the A. pallipes probe. The presence of A. torrentium is confirmed at 6 out of 15 sites. At four of these sites, A. torrentium is detected for the first time. In contrast, the presence of A. torrentium was not detected at two sites already known to harbour the species. Finally, the presence of A. pallipes was confirmed in the station belonging to the Tagliamento basin. The methodology described, which allows the distinction between the two species, paves the way for the parallel detection of the stone crayfish and the white-clawed crayfish (A. pallipes) through eDNA analysis.
Publication status:Published
Publication version:Version of Record
Publication date:10.03.2022
Year of publishing:2022
Number of pages:Str. 1-14
Numbering:Vol. 14, iss. 3
PID:20.500.12556/DiRROS-19339 New window
UDC:59
ISSN on article:1424-2818
DOI:/10.3390/d14030205 New window
COBISS.SI-ID:101087747 New window
Note:Nasl. z nasl. zaslona; Opis vira z dne 16. 3. 2022; Soavtorji: Massimo Zanetti, David Stanković, Umberto Fattori, Victoria Bertucci-Maresca, Piero G. Giulianini, Alberto Pallavicini; Št. članka: 205;
Publication date in DiRROS:16.07.2024
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Record is a part of a journal

Title:Diversity
Shortened title:Diversity
Publisher:MDPI
ISSN:1424-2818
COBISS.SI-ID:517523737 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0255-2017
Name:Združbe, interakcije in komunikacije v ekosistemih

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-3015-2021
Name:fDNAaqua – Zbiranje okoljske DNA s pomočjo filtratorskih organizmov: orodje za spremljanje biotske raznovrstnosti vod

Funder:Other - Other funder or multiple funders
Funding programme:Friuli Venezia Giulia Region

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:koščak, koščenec, detekcija, varstvo narave, okoljska DNA, eDNA monitoring potočnih rakov, 16S rRNA, Austropotamobius torrentium, Austropotamobius pallipes


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