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Title:Biological and genetic characterization of Physostegia chlorotic mottle virus in Europe based on host range, location, and time
Authors:ID Temple, Coline (Author)
ID Blouin, Arnaud G. (Author)
ID De Jonghe, Kris (Author)
ID Foucart, Yoika (Author)
ID Botermans, Marleen (Author)
ID Westenberg, Marcel (Author)
ID Schoen, Ruben (Author)
ID Gentit, Pascal (Author)
ID Visage, Michèle (Author)
ID Verdin, Eric (Author)
ID Rivarez, Mark Paul Selda (Author)
ID Kutnjak, Denis (Author)
ID Vučurović, Ana (Author)
Files:URL URL - Source URL, visit https://doi.org/10.1094/PDIS-12-21-2800-RE
 
.pdf PDF - Presentation file, download (1,31 MB)
MD5: 248D58FFFED462BA934766B403F25523
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:Application of high throughput sequencing (HTS) technologies enabled the first identification of Physostegia chlorotic mottle virus (PhCMoV) in 2018 in Austria. Subsequently, PhCMoV was detected in Germany and Serbia on tomatoes showing severe fruit mottling and ripening anomalies. We report here how prepublication data-sharing resulted in an international collaboration across eight laboratories in five countries, enabling an in-depth characterization of PhCMoV. The independent studies converged toward its recent identification in eight additional European countries and confirmed its presence in samples collected 20 years ago (2002). The natural plant host range was expanded from two to nine species across seven families, and we confirmed the association of PhCMoV presence with severe fruit symptoms on economically important crops such as tomato, eggplant, and cucumber. Mechanical inoculations of selected isolates in the greenhouse established the causality of the symptoms on a new indexing host range. In addition, phylogenetic analysis showed a low genomic variation across the 29 near-complete genome sequences available. Furthermore, a strong selection pressure within a specific ecosystem was suggested by nearly identical sequences recovered from different host plants through time. Overall, this study describes the European distribution of PhCMoV on multiple plant hosts, including economically important crops on which the virus can cause severe fruit symptoms. This work demonstrates how to efficiently improve knowledge on an emergent pathogen by sharing HTS data and provides a solid knowledge foundation for further studies on plant rhabdoviruses.
Publication status:Published
Publication version:Version of Record
Publication date:12.10.2022
Year of publishing:2022
Number of pages:str. 2797-2807
Numbering:Vol. 106, no. 11
PID:20.500.12556/DiRROS-19327 New window
UDC:578
ISSN on article:0191-2917
DOI:10.1094/PDIS-12-21-2800-RE New window
COBISS.SI-ID:118755331 New window
Note:Ostali avtorji: Arnaud G. Blouin, Kris De Jonghe, Yoika Foucart, Marleen Botermans, Marcel Westenberg, Ruben Schoen, Pascal Gentit, Michèle Visage, Eric Verdin, Catherine Wipf-Scheibel, Heiko Ziebell, Yahya Z. A. Gaafar, Amjad Zia, Xiao-Hua Yan, Katja R. Richert-Pöggeler, Roswitha Ulrich, Mark Paul S. Rivarez, Denis Kutnjak, Ana Vučurović, and Sébastien Massart;
Publication date in DiRROS:17.07.2024
Views:417
Downloads:190
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Record is a part of a journal

Title:Plant disease
Shortened title:Plant dis.
Publisher:American Phytopathological Society
ISSN:0191-2917
COBISS.SI-ID:5660935 New window

Document is financed by a project

Funder:EC - European Commission
Project number:813542
Name:Innovative Network for Next Generation Training and Sequencing of Virome
Acronym:INEXTVIR

Funder:EC - European Commission
Project number:871029
Name:European Virus Archive GLOBAL
Acronym:EVA-GLOBAL

Funder:EC - European Commission
Funding programme:Euphresco Project
Project number:2018-A-293
Name:Phytosanitary Risks of Newly Introduced Crops (PRONC)

Licences

License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
Description:The most restrictive Creative Commons license. This only allows people to download and share the work for no commercial gain and for no other purposes.

Secondary language

Language:Slovenian
Keywords:biološka karakterizacija, genetska karakterizacija, PhCMoV, rastlinski virusi


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