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Title:Nature-inspired substituted 3-(imidazol-2-yl) morpholines targeting human topoisomerase IIα : dynophore-derived discovery
Authors:ID Herlah, Barbara (Author)
ID Janežič, Matej (Author)
ID Ogris, Iza (Author)
ID Golič Grdadolnik, Simona (Author)
ID Kološa, Katja (Author)
ID Žabkar, Sonja (Author)
ID Žegura, Bojana (Author)
ID Perdih, Andrej (Author)
Files:URL URL - Source URL, visit https://doi.org/10.1016/j.biopha.2024.116676
 
.pdf PDF - Presentation file, download (7,99 MB)
MD5: BD6F61C36048CEF603C2D04E9673B6BD
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo KI - National Institute of Chemistry
Abstract:The molecular nanomachine, human DNA topoisomerase IIα, plays a crucial role in replication, transcription, and recombination by catalyzing topological changes in the DNA, rendering it an optimal target for cancer chemotherapy. Current clinical topoisomerase II poisons often cause secondary tumors as side effects due to the accumulation of double-strand breaks in the DNA, spurring the development of catalytic inhibitors. Here, we used a dynamic pharmacophore approach to develop catalytic inhibitors targeting the ATP binding site of human DNA topoisomerase IIα. Our screening of a library of nature-inspired compounds led to the discovery of a class of 3-(imidazol-2-yl) morpholines as potent catalytic inhibitors that bind to the ATPase domain. Further experimental and computational studies identified hit compound 17, which exhibited selectivity against the human DNA topoisomerase IIα versus human protein kinases, cytotoxicity against several human cancer cells, and did not induce DNA double-strand breaks, making it distinct from clinical topoisomerase II poisons. This study integrates an innovative natural product-inspired chemistry and successful implementation of a molecular design strategy that incorporates a dynamic component of ligand-target molecular recognition, with comprehensive experimental characterization leading to hit compounds with potential impact on the development of more efficient chemotherapies.
Keywords:topoisomerase II, catalytic inhibitors, chemotherapy, DNA damage, cancer
Publication status:Published
Publication version:Version of Record
Publication date:01.06.2024
Year of publishing:2024
Number of pages:str. 1-18
Numbering:Vol. 175, [article no.] 116676
Source:Biomedicine & pharmacotherapy
PID:20.500.12556/DiRROS-19029 New window
UDC:615.9
ISSN on article:1950-6007
DOI:10.1016/j.biopha.2024.116676 New window
COBISS.SI-ID:196316419 New window
Copyright:© 2024 The Authors.
Note:Soavtorji: Matej Janežič, Iza Ogris, Simona Golič Grdadolnik, Katja Kološa, Sonja Žabkar, Bojana Žegura, Andrej Perdih; Nasl. z nasl. zaslona; Opis vira z dne 22. 5. 2024;
Publication date in DiRROS:03.06.2024
Views:200
Downloads:77
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Record is a part of a journal

Title:Biomedicine & pharmacotherapy
Publisher:Éditions scientifiques et médicales Elsevier
ISSN:1950-6007
COBISS.SI-ID:23136261 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-4402
Name:Dinamični model molekulskega stroja DNA topoizomeraze tipa II in razvoj katalitičnih inhibitorjev

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-4400
Name:Vrednotenje prehodnih stanj proteinov

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0012
Name:Molekulske simulacije, bioinformatika in načrtovanje zdravilnih učinkovin

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0010
Name:Folding in dinamika biomolekularnih sistemov

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0245
Name:Ekotoksiologija, toksikološka genomika in karcinogeneza

Licences

License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
Description:The most restrictive Creative Commons license. This only allows people to download and share the work for no commercial gain and for no other purposes.
Licensing start date:29.04.2024
Applies to:Text and Data Mining valid from 2024-06-01 Text and Data Mining valid from 2024-06-01 Version of Record valid from 2024-04-29

Secondary language

Language:Undetermined
Title:Nature-inspired substituted 3-(imidazol-2-yl) morpholines targeting human topoisomerase IIα: dynophore-derived discovery


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