| Title: | Increased diversity of citrus tristeza virus in Europe |
|---|
| Authors: | ID Zindović, Jelena (Author)
ID Čizmović, Miroslav (Author)
ID Vučurović, Ana (Author)
ID Margaria, Paolo (Author)
ID Škorić, Dijana (Author) |
|---|
| Files: |  URL - Source URL, visit https://doi.org/10.1094/PDIS-09-23-1718-RE
 PDF - Presentation file, download (1,18 MB)
MD5: A579E02147A5C4120382514AE8F861F1
|
|---|
| Language: | English |
|---|
| Typology: | 1.01 - Original Scientific Article |
|---|
| Organization: |  NIB - National Institute of Biology
|
|---|
| Abstract: | This study investigated the genetic diversity of citrus tristeza virus (CTV) isolates from Montenegro and Croatia, European countries with the northernmost citrus growing regions situated on the Eastern Adriatic coast. Fifteen complete or nearly complete CTV genomes were reconstructed from high-throughput sequencing of samples collected in distinct municipalities in Montenegro and Opuzen municipality in Croatia. Phylogenetic analyses assigned some of the sequences to VT and T30 strains, previously recorded in Europe, while remarkably other isolates were placed in S1 and RB groups, which have not been reported in Europe so far. In addition, a new phylogenetic lineage including only isolates from Montenegro was delineated and tentatively proposed as the MNE cluster. Recombination analysis revealed evidence of 11 recombination events in the sequences obtained in this study, between isolates of related strains, within isolates of the same strain, and between distant strains. These findings show that CTV diversity in Europe is higher than reported before and calls for the re-evaluation of management strategies. |
|---|
| Keywords: | complete genomes, genotyping, citrus tristeza virus, CTV, non-EU strain |
|---|
| Publication status: | Published |
|---|
| Publication version: | Version of Record |
|---|
| Publication date: | 21.11.2023 |
|---|
| Year of publishing: | 2023 |
|---|
| PID: | 20.500.12556/DiRROS-18580  |
|---|
| UDC: | 632 |
|---|
| ISSN on article: | 0191-2917 |
|---|
| DOI: | 10.1094/PDIS-09-23-1718-RE |
|---|
| COBISS.SI-ID: | 179551235 |
|---|
| Note: | Soavtorji: Miroslav Čizmović, Ana Vučurović, Paolo Margaria, and Dijana Škorić;
Published online: 21 Nov 2023;
Članek v PDF formatu obsega 34 str.;
|
|---|
| Publication date in DiRROS: | 29.03.2024 |
|---|
| Views: | 654 |
|---|
| Downloads: | 265 |
|---|
| Metadata: |    |
|---|
|
:
|
Copy citation |
|---|
| | | | Share: |  |
|---|
Hover the mouse pointer over a document title to show the abstract or click
on the title to get all document metadata. |
