Digital repository of Slovenian research organisations

Search the repository
A+ | A- | Help | SLO | ENG

Query: search in
search in
search in
search in

Options:
  Reset


Query: "keywords" (modelling) .

21 - 30 / 33
First pagePrevious page1234Next pageLast page
21.
Where to search: the use of opportunistic data for the detection of an invasive forest pest
Maarten De Groot, Nikica Ogris, Mark van der Meij, Michael J.O. Pocock, 2022, original scientific article

Abstract: Early detection is important for the management of invasive alien species. In the last decade citizen science has become an important source of such data. Here, we used opportunistic records from the “LIFE ARTEMIS” citizen science project, in which people submitted records from places where they observed tree pests, to understand the distribution of a rapidly-spreading forest pest: the oak lace bug (Corythucha arcuata) in Slovenia. These citizen science records were not distributed randomly. We constructed a species distribution model for C. arcuata that accounted for the biased distribution of citizen science by using the records of other tree pests and diseases from the same project as pseudo-absences (so-called constrained pseudo-absences), and compared this to a model with pseudo-absences selected randomly from across Slovenia. We found that the constrained pseudo-absence model showed that C. arcuata was more likely to be found in east, in places with more oak trees and at lower elevations, and also closer to highways and railways, indicating introduction and dispersal by accidental human transport. The outputs from the model with random pseudo-absences were broadly similar, although estimates from this model tended to be higher and less precise, and some factors that were significant (proximity to minor roads and human settlements) were artefacts of recorder bias, showing the importance of taking the distribution of recording into account wherever possible. The finding that C. arcuata is more likely to be found near highways allows us to design advice for where future citizen science should be directed for efficient early detection.
Keywords: Oak lace bug, ecological modelling, citizen science, invasive alien species, early detection, Corythucha arcuata
Published in DiRROS: 08.09.2022; Views: 504; Downloads: 254
.pdf Full text (2,79 MB)
This document has many files! More...

22.
23.
Phylogenetic relations and range history of jerboas of the Allactaginae subfamily (Dipodidae, Rodentia)
Vladimir S. Lebedev, Georgy I. Shenbrot, Boris Kryštufek, Ahmad Mahmoudi, Marina N. Melnikova, Evgeniya N. Solovyeva, Alexandra A. Lisenkova, Enkhbat Undrakhbayar, Konstantin A. Rogovin, Alexey V. Surov, Ana A. Bannikova, 2022, original scientific article

Abstract: Five-toed jerboas of the subfamily Allactaginae comprise several complex taxa occurring over a wide distribution range covering a large part of the Eurasian arid belt. In this study, we employed current methods of molecular phylogenetics based on 15 nuclear genes and the mitochondrial gene cytb to revise relations and systematics within Allactaginae. We also applied species distribution modelling projected on paleo-environmental data to reconstruct the geographic patterns of speciation in Allactaginae. We elucidated the intergeneric relationships within this subfamily and clarifed interspecies relations within the genus Scarturus. Moreover, our results demonstrate the species status of S. caprimulga; outline the currently understudied diversity within Orientallactaga, Allactaga, and Pygeretmus; and improve the divergence estimates of these taxa. Based on our results from modelling of geographic range fragmentation in allactagines, we suggest the dating and location of speciation events and present hypotheses regarding general habitat niche conservatism in small mammals.
Keywords: molecular phylogeny, mitochondrial DNA, nuclear DNA, habitat modelling, phylogenetic history
Published in DiRROS: 28.01.2022; Views: 728; Downloads: 605
.pdf Full text (11,47 MB)
This document has many files! More...

24.
Empirical approach for modelling tree phenology in mixed forests using remote sensing
Koffi Dodji Noumonvi, Gal Oblišar, Ana Žust, Urša Vilhar, 2021, original scientific article

Abstract: : Phenological events are good indicators of the effects of climate change, since phenological phases are sensitive to changes in environmental conditions. Although several national phenological networks monitor the phenology of different plant species, direct observations can only be conducted on individual trees, which cannot be easily extended over large and continuous areas. Remote sensing has often been applied to model phenology for large areas, focusing mostly on pure forests in which it is relatively easier to match vegetation indices with ground observations. In mixed forests, phenology modelling from remote sensing is often limited to land surface phenology, which consists of an overall phenology of all tree species present in a pixel. The potential of remote sensing for modelling the phenology of individual tree species in mixed forests remains underexplored. In this study, we applied the seasonal midpoint (SM) method with MODIS GPP to model the start of season (SOS) and the end of season (EOS) of six different tree species in Slovenian mixed forests. First, substitute locations were identified for each combination of observation station and plant species based on similar environmental conditions (aspect, slope, and altitude) and tree species of interest, and used to retrieve the remote sensing information used in the SM method after fitting the best of a Gaussian and two double logistic functions to each year of GPP time series. Then, the best thresholds were identified for SOS and EOS, and the results were validated using cross-validation. The results show clearly that the usual threshold of 0.5 is not best in most cases, especially for estimating the EOS. Despite the difficulty in modelling the phenology of different tree species in a mixed forest using remote sensing, it was possible to estimate SOS and EOS with moderate errors as low as <8 days (Fagus sylvatica and Tilia sp.) and <10 days (Fagus sylvatica and Populus tremula), respectively.
Keywords: phenology modelling, start of season, end of season, remote sensing, MODIS GPP, vegetation indices, threshold methods
Published in DiRROS: 23.08.2021; Views: 928; Downloads: 685
.pdf Full text (2,63 MB)
This document has many files! More...

25.
Reconstruction of brown bear population dynamics in Slovenia in the period 1998-2019 : ǂa ǂnew approach combining genetics and long-term mortality data
Klemen Jerina, Andrés Ordiz, 2021, original scientific article

Abstract: Reliable data and methods for assessing changes in wildlife population size over time are necessary for management and conservation. For most species, assessing abundance is an expensive and labor-intensive task that is not affordable on a frequent basis. We present a novel approach to reconstructing brown bear population dynamics in Slovenia in the period 1998-2019, based on the combination of two CMR non-invasive genetic estimates (in 2007 and 2015) and long-term mortality records, to show how the latter can help the study of population dynamics in combination with point-in-time estimates. The spring (i.e. including newborn cubs) population size estimate was 383 (CI: 336-432) bears in 1998 and 971 (CI: 825-1161) bears in 2019. In this period, the average annual population growth rate was 4.5 %. The predicted population size differed by just 7 % from the non-invasive genetic size estimate after eight years, suggesting that the method is reliable. It can predict the evolution of the population size under different management scenarios and provide information on key parameters, e.g. background mortality and the sex- and age-structure of the population. Our approach can be used for several other wildlife species, but it requires reliable mortality data over time.
Keywords: genetic estimates of population size, mortality records, population monitoring, population size, predictive modelling, brown bear
Published in DiRROS: 28.03.2021; Views: 4084; Downloads: 2370
.pdf Full text (1005,41 KB)
This document has many files! More...

26.
27.
28.
29.
Growth-limiting factors and climate response variability in Norway spruce (Picea abies L.) along an elevation and precipitation gradients in Slovenia
Jernej Jevšenak, Ivan Tychkov, Jožica Gričar, Tom Levanič, Jan Tumajer, Peter Prislan, Domen Arnič, Margarita Popkova, Vladimir V. Shishov, 2020, original scientific article

Abstract: Norway spruce (Picea abies L.) is among the most sensitive coniferous species to ongoing climate change. However, previous studies on its growth response to increasing temperatures have yielded contrasting results (from stimulation to suppression), suggesting highly site-specific responses. Here, we present the first study that applies two independent approaches, i.e. the nonlinear, process-based Vaganov-Shashkin (VS) model and linear daily response functions. Data were collected at twelve sites in Slovenia differing in climate regimes and ranging elevation between 170 and 1300 m a.s.l. VS model results revealed that drier Norway spruce sites at lower elevations are mostly moisture limited, while moist high-elevation sites are generally more temperature limited. Daily response functions match well the pattern of growth-limiting factors from the VS model and further explain the effect of climate on radial growth: prevailing growth-limiting factors correspond to the climate variable with higher correlations. Radial growth correlates negatively with rising summer temperature and positively with higher spring precipitation. The opposite response was observed for the wettest site at the highest elevation, which positively reacts to increased summer temperature and will most likely benefit from a warming climate. For all other sites, the future radial growth of Norway spruce largely depends on the balance between spring precipitation and summer temperature.
Keywords: Vaganov-Shashkin model, climate-growth correlations, tree rings, process-based modelling, dendroTools, dendroclimatology
Published in DiRROS: 21.10.2020; Views: 1245; Downloads: 991
.pdf Full text (1,94 MB)
This document has many files! More...

30.
Sensitivity analysis, calibration and validation of a phenology model for Pityogenes chalcographus (CHAPY)
Nikica Ogris, Mitja Ferlan, Tine Hauptman, Roman Pavlin, Andreja Kavčič, Maja Jurc, Maarten De Groot, 2020, original scientific article

Abstract: A phenology model of Pityogenes chalcographus was developed. The model quite accurately simulates the seasonal dynamics of P. chalcographus. Sensitivity analysis revealed the most influential parameters. CHAPY was calibrated and validated for Slovenia. Development of the model revealed several knowledge gaps.
Keywords: six-toothed spruce bark beetle, insect outbreak, population dynamics, voltinism, ecological modelling, pheromone trap, trap tree, monitoring
Published in DiRROS: 03.06.2020; Views: 2023; Downloads: 1163
.pdf Full text (1,35 MB)
This document has many files! More...

Search done in 0.21 sec.
Back to top