1. Seeing yew for the forest : a call to action for improving conservation and restoration of the European yew (Taxus baccata L.)Mélanie Saulnier, Necmi Aksoy, Claire Arnold, Dalibor Ballian, Tatiana Bebchuk, Sylvain Burri, Giacomo Calvia, Thomas Camagny, Yves Caraglio, Anna Cedro, 2026, original scientific article Abstract: The European yew (Taxus baccata L.) is a long-lived conifer of ecological, cultural, and historical importance across Eurasia. Despite its remarkable resilience, wide distribution, and symbolic importance, the species has experienced a long-term decline due to a complex interplay of climatic fluctuations, megafaunal extinctions, human exploitation, and insufficient regeneration. Recent studies in palaeoecology, archaeology, dendroecology, and conservation have revealed a species with greater ecological plasticity and a broader historical distribution than previously assumed. However, many fundamental questions remain unresolved, particularly regarding its biogeographical history, population dynamics, recruitment processes, and the drivers of its decline. This review stems from prior investigations of yew in the French Pyrenees and, more broadly, across Europe. These efforts led to a transdisciplinary seminar and opened a collaboration uniting >30 researchers across Eurasia. By synthesizing a wide array of data and perspectives, the article highlights key knowledge gaps and outlines emerging research priorities. These are organized thematically—past, present, and future—and include 25 questions on the species' ecological niche, life-history strategies, human interactions, genetic resilience, and conservation under global change. The article advocates for a shift towards integrative and long-term conservation strategies that embrace the historical legacies of yew populations, the general ecology of the species along with local ecological context dependence, and the urgency of future threats. By identifying pressing research needs, this review seeks to lay the foundation for new collaborative initiatives and to support evidence-based conservation of this emblematic yet understudied species. Keywords: Taxus baccata L., conservation, long-term history, current dynamics, ecological resilience, restoration ecology, priority research questions Published in DiRROS: 27.02.2026; Views: 70; Downloads: 44
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2. Native trees of the Mediterranean region : distribution, diversity and conservation challengesBruno Fady, Anna-Maria Farsakoglou, Maria Mercedes Caron, Khaled Abulaila, Jelena M. Aleksic, Sajad Alipour, Dalibor Ballian, Heba Bedair, Faruk Bogunić, Marwan Cheikh Albassatneh, 2025, original scientific article Abstract: Purpose of Review While 38% of tree species are at risk of extinction worldwide, their inventory and occurrence at ecologically and biogeographically meaningful scales is lacking in many parts of the world, including the biodiversity-rich Mediterranean region. Here, we provide presence/absence, extinction risk, biogeography and genetic diversity data of trees in 39 climatically and ecologically Mediterranean territories (so-called “botanical territories”) in North Africa, Western Asia and Southern Europe. Recent Findings The inventory includes 496 species and 147 subspecies from 50 families and 111 genera, including 48 species and 8 subspecies previously not considered as trees. We show that native tree species distribution is highly skewed across the tree of life with a few species-rich families such as the Rosaceae and the majority with less than 1% of all species. Endemism was not evenly distributed among botanical territories and neither was extinction risk, an assessment of which was lacking in almost half of the species. While no geographic trends were detectable, species richness was found to be positively correlated with botanical territory area and, when standardized by area, with habitat heterogeneity. Information on genetic diversity was lacking in two thirds of the species inventoried and mostly focused on species with economic importance. Summary Our data are open access and can be used by researchers and stakeholders for a wide range of purposes, including conservation and restoration. Our findings identified major native tree richness hotspots as well as key knowledge gaps and biases related to extinction risk and genetic diversity. Our findings also emphasize the importance of increased collaboration to support the conservation of Mediterranean forest trees. Keywords: biogeography, biodiversity, natural variation in plants, plant ecology, seed distribution, tree biology, conservation strategies, Mediterranean plant biodiversity Published in DiRROS: 26.02.2026; Views: 83; Downloads: 51
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4. Cultivation and utilization of Poplars, Willows and other fast-growing trees in Slovenia : report of the National poplar commission, time period: 2020-2023Gregor Božič, Andreja Ferreira, Anže Martin Pintar, Gordana Beltram, Marko Kovač, Darja Istenič, Marjana Westergren, Nikica Ogris, Barbara Piškur, Hojka Kraigher, Aleksander Koren, Tadej Törnar, Anja Cigan, Špela Ščap, Katja Kavčič Sonnenschein, Simon Veberič, Andraž Čarni, 2024, treatise, preliminary study, study Keywords: Poplar, Willow, Black Walnut, Black Locust, international commission, FAO, national report, questionnaire, genetics, forest protection, legislation, categorisation, forest products, ecology, Slovenia Published in DiRROS: 08.12.2025; Views: 306; Downloads: 141
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5. Decomposition of Whittaker’s gamma diversity : a novel way combining entropies and divergencesIvano Vascotto, Davide Agnetta, 2025, original scientific article Abstract: Accurate, standardized, and comparable methods for estimating biodiversity are crucial in ecology to properly assess and monitor the health of communities. Special cases of generalized entropy are commonly used to estimate alpha diversity. The related concept of generalized divergence can be used to estimate the beta diversity. Using cross entropy notion, we propose a modular decomposition of gamma diversity by using entropy and divergence functions. We prove that if alpha is Shannon entropy and beta is Kullback-Liebler divergence, the classical Whittaker’s gamma diversity is mathematically decomposed via our proposed local gamma index. To show the ecological application of this index and its generalization we compute the local gamma of several orders using a real large biological dataset. The index is discussed in detail for two limit cases, one where the contribution of rare species is the highest and one where richness and evenness are balanced. The index defines a gradient from communities that are dominated by a few common species toward samples shared among several uncommon ones. Our findings support divergence-based measures as practical estimators of beta diversity. Also, the framework here proposed, based on entropy, divergences and cross-entropies, allows us to compute the classic gamma diversity while providing components that are independent, comparable, self-reliant and pointwise distributed. Keywords: biodiversity, entropy, ecology, computational modelling Published in DiRROS: 28.10.2025; Views: 356; Downloads: 170
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6. Effects of biotic and abiotic stressors on asymmetries and head size in two sympatric lizard speciesAjša Alagić, Miha Krofel, Marko Lazić, Anamarija Žagar, 2020, complete scientific database of research data Abstract: Organisms face numerous environmental stressors, which can affect developmental precision. Developmental instability can be used as an efficient and reliable bioindicator of environmental stressors and individual health. However, little information is available about effects of interspecific interactions on occurrence of developmental instability. We analyzed fluctuating asymmetry in two sympatric lizard species (Iberolacerta horvathi and Podarcis muralis), which exhibit a competitive interaction, to determine potential effects of altitude, interspecific competition and urbanization on a set of physical characteristics. We sampled 16 syntopic and allotopic populations and used methods of geometric morphometrics to analyze head morphology. We detected significant effect of altitude, but the trend was not linear: lizards had most asymmetrical heads at mid altitudes, which could be related to lower availability of favorable lizard habitats (open areas) at this altitude and therefore higher competition. We observed that lizards from allotopic populations attained larger head sizes compared to lizards in syntopy that experienced interspecific competition. This could suggest that in sites where competing species is absent, individuals can invest more energy in the development of the body. Moreover, head shape of Iberolacerta horvathi was more asymmetric compared to Podarcis muralis, which could indicate difference between species in the vulnerability to stress effects. We did not detect any statistically significant effect of urbanization, which could relate to relatively low degree of pollution and habitat degradation in our study area. Our results highlight the possibility of using lizards and developmental instability for bioindication of environmental stressors. Keywords: lizards, morphology, ecology, asymmetries, data Published in DiRROS: 27.10.2025; Views: 257; Downloads: 183
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7. Data from: Towards a functional understanding of species coexistence: ecomorphological variation in relation to whole-organism performance in two sympatric lizardsAnamarija Žagar, Miguel A. Carretero, Al Vrezec, Katarina Drašler, Antigoni Kaliontzopoulou, 2018, complete scientific database of research data Abstract: 1. We examined intra- and interspecific variation in functional morphology and whole-organism performance in a sympatric lizard species pair, Iberolacerta horvathi and Podarcis muralis, in the area with a high potential for competition. 2. The biggest variation between species was found in two functional traits, bite force and climbing speed, linked with corresponding morphological traits. 3. The species with larger and taller heads, P. muralis, exhibited correspondingly stronger bite forces. The other species exhibited smaller and flatter head. Both traits may potentially promote segregation between species in trophic niche (stronger bites relate to harder prey) and in refuge use (flatter heads allow using narrower crevices, hence, influencing escaping from common predators). Stronger bites and larger heads also provide one species with a dominant position in interspecific agonistic interactions. 4. Females had longer trunks that impacted negatively on climbing speed, which may lower anti-predator escape abilities of the more trunk-dimorphic species, but positively influence reproductive effort. 5. Our results exemplify how the joint examination of morphological and functional traits of ecologically similar and sympatric species can provide a mechanistic background for understanding their coexistence, namely syntopic populations that are frequent in the study area. 6. The identified roles of functional morphology in this system of sympatric rock lizards support the contribution of functional diversification for the complexity of community structure via coexistence. Keywords: lizards, morphology, ecology, data Published in DiRROS: 24.10.2025; Views: 407; Downloads: 227
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8. ≠An ≠insight into the diet of the bull ray, Aetomylaeus bovinus (Geoffroy Saint-Hilaire, 1817) in the Northern Adriatic SeaLovrenc Lipej, Riccardo Battistella, Borut Mavrič, Danijel Ivajnšič, 2025, original scientific article Abstract: This study provides baseline information on the feeding habits of the bull ray, Aetomylaeus bovinus (Geoffroy Saint-Hilaire, 1817), in the Gulf of Venezia. Among 1557 prey items isolated from the stomachs of bull ray specimens, gastropods represented the overwhelming majority (93.8%). Within gastropods, Aporrhais pespelecani was the dominant species, followed by Gibbula magus and Bolinus brandaris – all characteristic elements of the biocoenosis of the muddy detritic bottom. We observed differences in prey structure between juveniles and adults, as well as sexes. Among fishes that proved to be particularly important in terms of biomass, the majority of prey items consisted of small pelagic fish, including pilchard (Sardina pilchardus) and horse mackerel (Trachurus sp.). This paper contributes new data on the feeding ecology of a lesser known and critically endangered batoid species. Keywords: myliobatids, feeding ecology, nursery, Gulf of Venice, batoids, endangered species, marine biology Published in DiRROS: 03.07.2025; Views: 658; Downloads: 316
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9. Spatial and temporal variation in vibroscape composition in two grassland habitatsJuan José López Díez, Rok Šturm, Jernej Polajnar, Meta Virant-Doberlet, 2025, original scientific article Abstract: Substrate-borne vibrational signaling is one of the oldest and taxonomically widespread forms of animal communication. For many animals the natural vibrational environment (vibroscape) is an essential source of information underlying their behavioral decisions; however, the structure and dynamics of vibroscape composition of the natural habitats are largely unexplored. We studied vibroscape composition in a eutrophic lowland hay meadow and a sub-Mediterranean dry karst grassland. The results obtained by simultaneous, multi-channel recordings showed that vibroscape composition changes throughout the day and from day to day, differs between plant species, depends on the spatial position of the plant within the habitat and is also influenced by environmental parameters. The results highlight the unpredictability and high variability of the vibrational environment encountered by plant-dwelling insects, and the complexity in implementing biodiversity monitoring based on vibroscape composition. Keywords: biotremology, ecotremology, vibroscape, vibrational communication, vibrational community, environmental factors, zoology, ecology Published in DiRROS: 02.07.2025; Views: 617; Downloads: 527
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10. Crayfish pet trade as a pathway for the introduction of known and novel virusesKatarina Bačnik, Luka Kranjc, Leticia Botella, Ivana Maguire, Dora Pavić, Jiří Patoka, Paula Dragičević, Martin Blaha, Ana Bielen, Antonín Kouba, Denis Kutnjak, Sandra Hudina, 2025, original scientific article Abstract: Expanding international pet trade has emerged as one of the main introduction pathways of aquatic invasive species, with ornamental crayfish species commonly available on the EU and global markets. Besides most frequently studied crayfish pathogens, such as Aphanomyces astaci and white spot syndrome virus (WSSV), ornamental crayfish carry associated microbial communities, which may potentially lead to the emergence of known or even novel diseases following intentional or unintentional release of animals into the wild. This is especially problematic in the case of viruses, which represent an important, yet considerably understudied, group of crayfish pathogens. Here we analyzed viromes of hepatopancreas tissue of four crayfish species acquired in the international pet trade in Europe (Procambarus clarkii, Procambarus alleni, Cherax holthuisi, and Cherax quadricarinatus) using a high throughput sequencing based metagenomic approach. Seven different known viruses were identified, which were previously either directly associated with crayfish (WSSV, Cherax quadricarinatus reovirus, chequa iflavirus, athtab bunya-like virus) or with hosts from subphylum Crustacea or invertebrates associated with freshwater environment (Shahe ispoda virus 5, Dicistroviridae sp.). Additional sequences represented 8 potential novel and divergent RNA viruses, most similar to sequences belonging to members of Picornavirales, Elliovirales, Reovirales, Hepelivirales, Tolivirales and Ghabrivirales orders. We discuss our findings in relation to their phylogenetic relationships, geographical origins, and putative pathogenicity implications. The results highlight the need for further research into the risks related to disease emergence associated with the pet trade. Keywords: virome, RNA viruses, ornamental crayfish, pet-trade, high throughput sequencing, ecology, molecular biology, pathology, virology, environmental risk assessment Published in DiRROS: 23.05.2025; Views: 882; Downloads: 566
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