1. Numerical investigation of electroporation in the presence of silica-coated magnetic nanoparticles : electric field perturbation and transmembrane voltage enhancement during pulse rise timeElisabetta E. Sieni, Slavko Kralj, Vincenzo Tucci, 2026, original scientific article Abstract: Electroporation outcomes are governed by the local electric field distribution and transmembrane voltage, both of which may be altered by nanoscale elements positioned near the cell membrane. In this study, we developed a two-dimensional finite-element electromagnetic model to investigate the effect of a membrane-proximal silica-coated superparamagnetic iron oxide nanoparticle cluster during a trapezoidal electroporation pulse. The model couples electric and magnetic field components with a membrane electroporation formulation based on Smoluchowski-type pore-density dynamics. Simulations were performed with and without a nanoparticle positioned 5 nm from the membrane, considering different cytosol and extracellular medium conductivities. The results show that the nanoparticle induces a highly localized perturbation of the electric field, whose magnitude depends on the sampling region and conductivity contrast. Transmembrane voltage is modestly and transiently modulated during pulse rise time, whereas the effect is limited during the pulse plateau. Pore-density analysis further indicates that the nanoparticle does not induce a generalized increase in electroporation-related parameters and may locally reduce pore density near the nanoparticle–membrane interface. Overall, the model identifies transient and conductivity-dependent nanoscale field redistribution caused by membrane-proximal silica-coated magnetic nanoparticles, while highlighting the need for three-dimensional modeling and experimental validation before inferring electroporation enhancement. Keywords: electroporation, finite element analysis, magnetic nanoparticles Published in DiRROS: 29.07.2026; Views: 93; Downloads: 68
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2. Edible optical microcavities for optical barcoding, authentication, and sensingAbdur Rehman Anwar, Slavko Kralj, Matjaž Humar, 2026, original scientific article Abstract: The safety, authenticity, and traceability of food and pharmaceutical products are critical challenges, especially in the context of widespread counterfeiting. Most existing anti-counterfeiting and sensing technologies are applied externally to packaging, making them vulnerable to tampering. A more robust approach is to incorporate them directly into edible products. Whispering-gallery modes (WGMs), highly sensitive optical resonances supported by spherical microcavities, provide a promising platform due to their environmental responsiveness and spectral uniqueness. Here, we demonstrate edible WGM microcavities based on chlorophyll-coated silica microspheres. Monodisperse microspheres exhibit stable WGM resonances under continuous-wave laser excitation, with quality factors ranging from 2,000 to 10,000. Individual microsphere diameters are determined with a precision of approximately 40 nm. When embedded in low-refractive-index agarose matrices, the microspheres generate size-specific spectral signatures that function as optical barcodes and remain stable for at least six months. Based on intrinsic size variations, we further demonstrate edible physical unclonable functions (PUFs) with stable and unique optical identifiers. In addition, the microcavities enable sugar concentration measurements with uncertainties as low as 0.23 percentage points and pH sensing with an accuracy of approximately 0.3 pH units, when embedded in a pH-responsive hydrogel. These results establish edible WGM microcavities as a multifunctional platform for secure labeling, sensing, and anti-counterfeiting in consumable products. Keywords: edible materials, whispering gallery modes, optical barcodes, physical unclonable functions, sensors Published in DiRROS: 29.07.2026; Views: 97; Downloads: 72
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3. Anisotropic magnetic particles with different dimensions, morphologies and surface grafting for magnetic field-assisted biofilm removalNika Zaveršek, Maja Caf, Vincent Pautu, Laurine Marger, Parvaneh Esmaeilnejad-Ahranjani, Nikolaja Janež, Tanja Zupan, Saša Haberl Meglič, Aleš Berlec, Irena Milošević, Slavko Kralj, Jerica Sabotič, 2026, original scientific article Abstract: Microorganisms in biofilms are protected from environmental stressors and therefore exhibit strong resistance to conventional removal strategies, including chemical disinfectants and antibiotics. In this study, we systematically evaluated nanomaterial-based removal methods on Listeria innocua biofilms. Anisotropic magnetic particles, composed of iron oxide, and silver nanoparticles, known for their intrinsic antibacterial properties, were used to assess the potential of nanostructure-triggered biofilm disruption. We investigated how particle surface roughness and size affect biofilm removal under magnetic actuation, using both classical colony-forming unit quantification (viability assessment) and fluorescence-based detection via a reporter protein. The surface roughness and size of anisotropic magnetic particles only modestly affected biofilm disruption. Conversely, a synergistic effect was observed when anisotropic magnetic particles were grafted with silver nanoparticles. Furthermore, we used Enterococcus faecalis and Candida albicans biofilms and observed pronounced species-dependent variability of the silver-based treatments. Our results indicate that hybrid magneto–chemical strategies represent a promising and likely necessary approach for reliable and robust biofilm removal. Keywords: bacterial biofilm, magnetomechanical detachment, anisotropic magnetic nanoparticles, silver nanoparticles Published in DiRROS: 01.07.2026; Views: 145; Downloads: 132
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4. Computational modeling and characterization methods for rotating magnetic nanochain-enhanced lateral flow immunoassaysAlexey V. Orlov, Juri A. Malkerov, Alexandra S. Rakitina, Anastasiia Kudriavtseva, Alexander A. Minakov, Daniil I. Tselikov, Petr I. Nikitin, Slavko Kralj, 2026, original scientific article Abstract: This article provides comprehensive methodological guidance for implementing rotating magnetic nanochain-enhanced lateral flow immunoassays with volumetric magnetic detection. Rotating magnetic nanochains act as microscale stirrers that substantially enhance antibody-antigen binding kinetics through convective mixing, yet their integration into lateral flow platforms presents unique technical challenges requiring both computational optimization and specialized characterization. We describe complete workflows for: (i) computational fluid dynamics modeling using COMSOL Multiphysics to simulate nanochain rotation, fluid flow, and mass transport enhancement; (ii) electron microscopy characterization of magnetic nanochain morphology and size distributions; (iii) rotating magnetic field generator design and operation; and (iv) magnetic particle quantification measurement procedures for volumetric signal readout. Each section provides step-by-step instructions with sufficient detail to enable independent replication. The described methods enable development of lateral flow assays achieving sub-nanogram detection limits with rapid (6-minute) analysis times, addressing critical needs in point-of-care diagnostics. These methods complement our related research article in Biosensors and Bioelectronics by providing the technical foundation necessary for adoption and adaptation of this technology by other laboratories. Keywords: magnetic nanochains, lateral flow immunoassay, computational fluid dynamics, point-of-care diagnostic, rotating magnetic field, cardiac biomarkers Published in DiRROS: 20.05.2026; Views: 239; Downloads: 270
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5. Influence of particle size, shape, and magnetic properties on torque-driven biofilm removal using anisotropic magnetic particlesVincent Pautu, Laurine Marger, Maja Caf, Fabrice Marger, Mustapha Mekki, Slavko Kralj, Irena Milošević, 2026, original scientific article Abstract: Biofilms are structured communities of bacteria embedded within an extracellular polymeric substance (EPS) matrix, which forms a protective barrier that restricts drug penetration and increases antibiotic tolerance, making their complete elimination particularly challenging. Here, we investigate a magnetomechanical approach using rotating magnetic fields (RMFs) to deliver controlled mechanical stress to Enterococcus faecalis biofilms via anisotropic magnetic particles (AMPs). Microrods, nanochains, and nanorods with distinct sizes and magnetic properties were actuated under identical RMF conditions on implant-relevant titanium substrates. Micron-scale magnetic microrods generate sufficient magnetic torque to mechanically disrupt the EPS matrix and detach biofilm structures, significantly increasing suspended bacterial cells without marked bactericidal effects. In contrast, nanoscale AMPs do not induce biofilm detachment but cause membrane damage, increasing the proportion of injured cells. These findings demonstrate a size-dependent transition between microscale biofilm detachment and nanoscale membrane interactions, identifying particle size as the dominant parameter governing magneto-mechanical biofilm disruption. Keywords: magnetomechanical biofilm disruption, anisotropic magnetic particles, nano–micro scale bacterial interactions Published in DiRROS: 28.04.2026; Views: 296; Downloads: 241
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6. Lipid-phase-modulated interactions of gold nanoparticles with supported vesicular and planar membranesLaure Bar, Marta Lavrič, Maja Caf, Slavko Kralj, Raj Kumar Sadhu, Miha Škarabot, Aleš Iglič, George Cordoyiannis, Patricia Losada-Pérez, 2026, original scientific article Abstract: The thorough understanding of the interactions between nanoparticles and lipid membranes has attracted major interest over the past few decades. This spans fundamental biophysics and biomechanics, as well as medical applications, where nanoparticles could serve as potential drug carriers. The influence of the lipid phase in these interactions has been studied to markedly less extent with respect to the nanoparticle size, shape and coating, as well as the presence of electric charge in either the nanoparticles or the membranes. Seeking to gain new insights into the lipid phase, we have systematically investigated the role of the liquid-disordered, the gel-ordered, as well as the seldom-studied ripple phases in modulating the interaction strength between nanoparticles and biomimetic membranes. Supported lipid vesicles and supported lipid bilayers of different composition and amount of electric charge, as well as spherical functionalized Au nanoparticles with and without charge have formed our experimental platform. The results, obtained by quartz crystal microbalance with dissipation monitoring and complemented by atomic force microscopy, reveal a strikingly different mechanistic picture of the interactions between the various lipid phases and types of nanoparticles. We demonstrate enhanced vesicle rupture in the case of stiffer membranes, consistent with recent theoretical studies, yet supported by limited existing experimental evidence. This work advances fundamental understanding of lipid-state-driven nanoparticle–membrane interactions. Such insight is essential, as dynamic changes in bilayer rigidity, composition, and surface charge determine how membranes and nanoparticles interact. Keywords: supported lipid vesicles, supported lipid bilayers, gold nanoparticles, lipid phase, quartz crystal microbalance with dissipation monitoring (QCM-D), nanoparticle-membrane interactions Published in DiRROS: 10.04.2026; Views: 361; Downloads: 241
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7. Amyloid-▫$\beta$▫ 1-42 fibrils regulate SH-SY5Y cell adhesion in a delayed mannerUrša Pečar Fonović, Slavko Kralj, Janko Kos, 2026, original scientific article Abstract: Amyloid-β peptide (Aβ), a hallmark peptide in the pathology of Alzheimer's disease, together with the amyloid-β protein precursor, is increasingly associated with the disruption of cell adhesion. In addition to its well-characterized role in plaque formation and synaptic dysfunction, Aβ interacts with various adhesion molecules and extracellular matrix components, thereby impairing neuronal connectivity and integrity. We have shown that pretreatment of SH-SY5Y cells with Aβ42 fibrils affects cell adhesion; however, we did not observe this effect with Aβ42 monomers. Understanding the molecular mechanisms by which Aβ fibrils disrupt cell adhesion pathways may reveal new therapeutic approaches to prevent disease progression. Keywords: amiloid beta, amyloid-beta fibrils Published in DiRROS: 20.03.2026; Views: 367; Downloads: 357
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8. Modulation of contactless high intensity pulsed electromagnetic field induced electroporation and gene delivery efficacy using various nanoparticlesTamara Polajžer, Matej Krajnc, Slavko Kralj, Maja Caf, Rok Romih, Samo Hudoklin, Vitalij Novickij, Damijan Miklavčič, 2026, original scientific article Abstract: Introduction: High-intensity pulsed electromagnetic fields (HI-PEMF) can be used to trigger contactless permeabilization of the plasma membrane similar to electroporation (EP). The permeabilization efficiency and gene delivery by HI-PEMF in vitro are currently inferior to EP. It was suggested that the methodology can be improved with conductive gold nanoparticles (AuNPs), which are reported to amplify the induced electric field in close proximity to the cell membrane. Objectives: Therefore, in this work, we have studied different NPs, which varied in material/conductivity (gold and silica), size (10–50+ nm), shape (i.e., round and rods), concentration (50–200 µg/mL), and functionalization (pegylated or not), and combined them with HI-PEMF (6.7 T × 100 pulses, 1 Hz). Methods: The normal Chinese hamster ovary cell line (CHO) and the cancer human urinary bladder’s transitional carcinoma cell line (T24) were used as a model. We have characterized cell membrane permeabilization using propidium iodide (PI) and the efficacy of gene delivery using pEGFP-N1. Results: Larger NPs and higher NP concentrations resulted in up to a 10% increase in membrane permeability. In contrast, semispherical and rod-shaped AuNPs did not further enhance permeabilization efficiency. Gene delivery efficiency increased from 3% in control samples to 6% in the presence of 50 nm AuNPs. Overall, CHO cells were more susceptible to HI-PEMF-induced effects than T24 cells. Conclusions: This study shows the potential to increase gene delivery efficacy by combining HI-PEMF treatment with conductive NPs. However, it was concluded that the HI-PEMF-induced effects are highly dependent on the cell line, NP type, and concentration and therefore require further investigation. Keywords: gene delivery Published in DiRROS: 24.02.2026; Views: 510; Downloads: 316
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10. Magnetic field-driven strategies for biofilm disruption : from iron oxide nanoparticles to adaptive swarms of magnetic microrobotsMaja Caf, Parvaneh Esmaeilnejad-Ahranjani, Jelena Kološnjaj Tabi, Jerica Sabotič, Aleš Berlec, Nika Zaveršek, Stane Pajk, Abida Zahirović, Muriel Golzio, Irena Milošević, Slavko Kralj, 2026, review article Abstract: Biofilms, structured communities of microbial cells embedded in extracellular polymeric substances, are notorious for their resilience against conventional antimicrobial treatments. They contribute significantly to chronic infections and industrial biofouling, necessitating innovative strategies for their eradication. Magnetic iron oxide nanoparticles have emerged as a promising tool in combating biofilms due to their biocompatibility and unique physicochemical properties, which enable magnetic delivery of antibacterial agents, magnetic hyperthermia, magneto-mechanical actuation including mechanical biofilm disruption, and reversible dynamic magnetic assembly into hierarchical structures. This review describes developing stages of magnetic nanoscale weapons against biofilms ranging from individual iron oxide nanoparticles to complex hierarchical nanoparticle assemblies in the form of magnetic robots and their swarms. A vast array of possible antibiofilm and antibacterial functionalities originating from iron ions, individual iron oxide nanoparticles, spherical nanoparticle assemblies, magnetic robots, and swarms of robots are presented. Magnetic nanotools offer significant improvements and advantages over conventional methods for biofilm eradication, yet their successful future applications depend on addressing and overcoming critical material, biological, and engineering challenges. Keywords: biofilm, magnetic nanoparticles, magneto-mechanical actuation, microrobots, nanorobots Published in DiRROS: 13.01.2026; Views: 551; Downloads: 617
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