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1802. Heterogeneity of uroplakin localization in human normal urothelium, papilloma and papillary carcinomaDaša Zupančič, Rok Romih, 2013, published scientific conference contribution Abstract: Background. Uroplakins are differentiation-related membrane proteins of urothelium. We compared uroplakin expression and ultrastructural localization in human normal urothelium, papilloma and papillary carcinoma. Because of high recurrence rate of these tumours, treated by transurethral resection, we investigated urothelial tumour, resection border and uninvolved urothelium.Patients and methods. Urinary bladder samples were obtained from tumour free control subjects and patients with papilloma and papillary carcinoma. Immunohistochemical and immunoelectron labelling of uroplakins were performed.Results. In normal human urothelium with continuous uroplakin-positive superficial cell layer uroplakins were localized to flattened mature fusiform vesicles and apical plasma membrane of umbrella cells. Diverse uroplakin expression was found in papilloma and papillary carcinoma. Three aberrant differentiation stages of urothelial cells, not found in normal urothelium, were recognized in tumours. Diverse uroplakin expression and aberrant differentiation were occasionally found in resection border and in uninvolved urothelium.Conclusions. We demonstrated here that uroplakin expression and localization in urothelial tumours is altered when compared to normal urothelium. In patients with papilloma and papillary carcinoma immunolabelling of uroplakins at ultrastructural level shows aberrant urothelial differentiation. It is possible that aberrant differentiation stages of urothelial cells in resection border and in uninvolved urothelium contribute to high recurrence rate. Keywords: human urothelium, papilloma, papillary carcinoma Published in DiRROS: 03.04.2024; Views: 359; Downloads: 201 Full text (1,20 MB) This document has many files! More... |
1803. Expansive growth of two glioblastoma stem-like cell lines is mediated by bFGF and not by EGFNeža Podergajs, Narve Brekka, Bernhard Radlwimmer, Christel Herold-Mende, Krishna M. Talasila, Katja Tiemann, Uroš Rajčević, Tamara Lah Turnšek, Rolf Bjerkvig, Hrvoje Miletic, 2013, published scientific conference contribution Abstract: Background. Patient-derived glioblastoma (GBM) stem-like cells (GSCs) represent a valuable model for basic and therapeutic research. GSCs are usually propagated in serum-free Neural Basal medium supplemented with bFGF and EGF. Yet, the exact influence of these growth factors on GSCs is still unclear. Recently it was suggested that GBM stemlike cells with amplified EGFR should be cultured in stem cell medium without EGF, as the presence of EGF induced rapid loss of EGFR amplification. However, patient biopsies are usually taken into culture before their genomic profiles are defined. Thus, an important question remains whether GBM cells without EGFR amplification also can be cultured in stem cell medium without EGF.Meterials and methods. To address this question, we used two heterogeneous glioblastoma GSC lines (NCH421k and NCH644) that lack EGFR amplification.Results. Although both cell lines showed very low EGFR expression under standard growth conditions, bFGF stimulation induced higher expression of EGFR in NCH644. In both cell lines, expression of the stem cell markers nestin and CD133 was higher upon stimulation with bFGF compared to EGF. Importantly, bFGF stimulated the growth of both cell lines, whereas EGF had no effect. We verified that the growth stimulation by bFGF was either mediated by proliferation (NCH421k) or resistance to apoptosis (NCH644).Conclusions. We demonstrate that GSC cultures without EGFR amplification can be maintained and expanded with bFGF, while the addition of EGF has no significant effect and therefore can be omitted. Keywords: glioblastoma, stem cell cultures, bFGF Published in DiRROS: 03.04.2024; Views: 424; Downloads: 196 Full text (575,69 KB) This document has many files! More... |
1804. Kako podnebne spremembe in velikopovršinske motnje vplivajo na naravne ekosisteme? : učno gradivo pri predmetu Globalne spremembe in gozdni ekosistemi, BF Odd. za gozdarstvo in obnovljive gozdne vireLado Kutnar, 2024, other educational material Keywords: podnebne spremembe, motnje, temperature, gozdni ekosistemi, drevesne vrste, pričakovana razporeditev gozdov, model, IPCC, ARSO, Slovenija Published in DiRROS: 03.04.2024; Views: 398; Downloads: 0 |
1805. Metabolic consequences of anabolic steroids, insulin, and growth hormone abuse in recreational bodybuilders : implications for the world anti-doping agency passportFilippo Giorgio Di Girolamo, Chiara Biasinutto, Alessandro Mangogna, Nicola Fiotti, Pierandrea Vinci, Rado Pišot, Filippo Mearelli, Boštjan Šimunič, Chiara Roni, Gianni Biolo, 2024, original scientific article Abstract: Background Hormonal doping in recreational sports is a public-health concern. The World Anti-Doping Agency (WADA) promoted the creation of the Athlete Biological Passport, aiming to monitor athlete’s biological variables over time to facilitate indirect detection of doping. Detection tests for anabolic androgenic steroids (AAS) and growth hormone (GH) are available while insulin abuse cannot be revealed. We have determined in recreational bodybuilders the metabolic effects associated with different patterns of hormone abuse. All analyses were conducted using Statistical Package for Social Sciences (SPSS) 21.0 software (SPSS Chicago, IL). Results We have assessed plasma concentrations of selected metabolic markers and fatty acid content in erythrocyte membranes of 92 male bodybuilders and in 45 healthy controls. Hormonal abuse was identified by anonymous questionnaires. 43% (%) of recruited bodybuilders regularly abused hormones, i.e., anabolic androgenic steroids (95%) often associated with GH (30%) and/or insulin (38%). HDL-cholesterol was lower in insulin and/or GH abusers. Alanine (ALT) and aspartic (AST) transaminases were greater in hormone abusing bodybuilders than in non-doping bodybuilders and controls. Insulin doping was selectively associated with increased plasma ALT-to-AST ratio. In erythrocyte membranes, elongase activity (i.e., stearic-to-palmitic ratio) was lower in insulin and/or growth hormone doping, whereas increased Δ-9 desaturase activity (i.e., palmitoleic-to-palmitic ratio) was selectively associated with insulin doping. Conclusions In conclusion, our study demonstrates that insulin and GH abuse are characterized by multiple alterations of specific metabolic markers. Although further studies are needed to test whether longitudinal monitoring of selected metabolic marker such as muscle contraction time, HDL levels, ALT-AST ratio as well as the activities of selected enzymes (e.g. Δ-9 desaturase and elongase), could contribute to the detection of insulin and GH abuse in sport. Keywords: bodybuilders, doping, drug abuse, matabolism Published in DiRROS: 03.04.2024; Views: 484; Downloads: 183 Full text (1,38 MB) This document has many files! More... |
1806. Poročilo o preskusu št.: LVG 2024-020 : vzorec št. 2024/00055Barbara Piškur, Špela Hočevar, Maarten De Groot, Nikica Ogris, 2024, expertise, arbitration decision Keywords: varstvo gozdov, morfološke analize, Armillaria, evropski macesen, Larix decidua, razkroj skorje, vlažno rastišče, mraznice, saprofit, trohnoba Published in DiRROS: 02.04.2024; Views: 404; Downloads: 151 Full text (1,12 MB) |
1807. Characterization and Mechanical Properties of Sintered Clay MineralsSara Tominc, Vilma Ducman, Jakob Koenig, Srečo D. Škapin, Matjaž Spreitzer, 2024, published scientific conference contribution Abstract: The need to reduce energy consumption and the carbon footprint generated by firing ceramics has stimulated research to develop sintering processes carried out at lower temperatures(ideally not above 300 °C) and high pressures (up to 600 MPa), the so-called cold sintering process (CSP) (Grasso et al., 2020, Maria et al., 2017). To evaluate the applicability of CSP to clays, we focused on two representative clay minerals, kaolinite and illite, and on the natural clay material obtained from a Slovenian brick manufacturer. The selected clay materials were characterized on the basis of mineralogical-chemical composition (XRD, XRF) and particle size distribution (SEM analysis, PSD, BET). The powders of clay minerals and natural clay material were first sintered in a heating microscope to determine the sintering conditions and then in a laboratory furnace at 1100 °C for 2 hours and additionally at 1300 °C for kaolinites. The effect of compression of the initial powders on their final properties was also investigated. Keywords: conventional sintering, cold sintering, clay minerals, characterization, mechanical properties Published in DiRROS: 29.03.2024; Views: 493; Downloads: 239 Full text (681,81 KB) This document has many files! More... |
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1809. Transcriptome-informed identification and characterization of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genesMojca Juteršek, Iryna Gerasymenko, Marko Petek, Kristina Gruden, Špela Baebler, 2024, original scientific article Abstract: Insect physiology and reproduction depend on several terpenoid compounds, whose biosynthesis is mainly unknown. One enigmatic group of insect monoterpenoids are mealybug sex pheromones, presumably resulting from the irregular coupling activity of unidentified isoprenyl diphosphate synthases (IDSs). Here, we performed a comprehensive search for IDS coding sequences of the pest mealybug Planococcus citri. We queried the available genomic and newly generated short- and long-read P. citri transcriptomic data and identified 18 putative IDS genes, whose phylogenetic analysis indicates several gene family expansion events. In vitro testing confirmed regular short-chain coupling activity with five gene products. With the candidate with highest IDS activity, we also detected low amounts of irregular coupling products, and determined amino acid residues important for chain-length preference and irregular coupling activity. This work therefore provides an important foundation for deciphering terpenoid biosynthesis in mealybugs, including the sex pheromone biosynthesis in P. citri. Keywords: insect pheromones, isoprenyl diphosphate synthase, monoterpenes, phylogenetic analysis Published in DiRROS: 29.03.2024; Views: 556; Downloads: 302 Full text (2,04 MB) This document has many files! More... |
1810. Fast and accurate multiplex identification and quantification of seven genetically modified soybean lines using six-color digital PCRAlexandra Bogožalec Košir, Sabine Muller, Jana Žel, Mojca Milavec, Allison C. Mallory, David Dobnik, 2023, original scientific article Abstract: The proliferation of genetically modified organisms (GMOs) presents challenges to GMO testing laboratories and policymakers. Traditional methods, like quantitative real-time PCR (qPCR), face limitations in quantifying the increasing number of GMOs in a single sample. Digital PCR (dPCR), specifically multiplexing, offers a solution by enabling simultaneous quantification of multiple GMO targets. This study explores the use of the Naica six-color Crystal dPCR platform for quantifying five GM soybean lines within a single six-plex assay. Two four-color assays were also developed for added flexibility. These assays demonstrated high specificity, sensitivity (limit of detection or LOD < 25 copies per reaction) and precision (bias to an estimated copy number concentration <15%). Additionally, two approaches for the optimization of data analysis were implemented. By applying a limit-of-blank (LOB) correction, the limit of quantification (LOQ) and LOD could be more precisely determined. Pooling of reactions additionally lowered the LOD, with a two- to eight-fold increase in sensitivity. Real-life samples from routine testing were used to confirm the assays’ applicability for quantifying GM soybean lines in complex samples. This study showcases the potential of the six-color Crystal dPCR platform to revolutionize GMO testing, facilitating comprehensive analysis of GMOs in complex samples. Keywords: digital PCR, dPCR, quantification, multiplexing, genetically modified organisms, 6-color system, virus diagnostics, virology Published in DiRROS: 29.03.2024; Views: 541; Downloads: 209 Full text (1,83 MB) This document has many files! More... |