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Naslov:Comprehensive reanalysis for CNVs in ES data from unsolved rare disease cases results in new diagnoses
Avtorji:ID Demidov, German (Avtor)
ID Yaldiz, Burcu (Avtor)
ID García Peláez, José (Avtor)
ID De Boer, Elke (Avtor)
ID Schuermans, Nika (Avtor)
ID Peterlin, Borut (Sodelavec pri raziskavi), et al.
Datoteke:.pdf PDF - Predstavitvena datoteka, prenos (3,06 MB)
MD5: BDAF1CA6674E665FEFD9737AEDA12CCF
 
URL URL - Izvorni URL, za dostop obiščite https://doi.org/10.1038/s41525-024-00436-6
 
Jezik:Angleški jezik
Tipologija:1.01 - Izvirni znanstveni članek
Organizacija:Logo UKC LJ - Univerzitetni klinični center Ljubljana
Povzetek:We report the results of a comprehensive copy number variant (CNV) reanalysis of 9171 exome sequencing datasets from 5757 families affected by a rare disease (RD). The data reanalysed was extremely heterogeneous, having been generated using 28 different enrichment kits by 42 different research groups across Europe partnering in the Solve-RD project. Each research group had previously undertaken their own analysis of the data but failed to identify disease-causing variants.Weapplied three CNV calling algorithms tomaximise sensitivity, and rare CNVs overlapping genes of interest, provided by four partner European ReferenceNetworks, were taken forward for interpretation by clinical experts. This reanalysis has resulted in a molecular diagnosis being provided to 51 families in this sample, with ClinCNV performing the best of the three algorithms. We also identified partially explanatory pathogenic CNVs in a further 34 individuals. This work illustrates the value of reanalysing ES cold cases for CNVs.
Ključne besede:rare diseases, reanalysis, copy number variant, disease-causing variants
Status publikacije:Objavljeno
Verzija publikacije:Objavljena publikacija
Leto izida:2024
Št. strani:str. 1-24
Številčenje:Vol. 9, [article no.] 49
PID:20.500.12556/DiRROS-28100 Novo okno
UDK:61:575
ISSN pri članku:2056-7944
DOI:10.1038/s41525-024-00436-6 Novo okno
COBISS.SI-ID:240092675 Novo okno
Opomba:Nasl. z nasl. zaslona; Opis vira z dne 20. 6. 2025;
Datum objave v DiRROS:10.03.2026
Število ogledov:63
Število prenosov:37
Metapodatki:XML DC-XML DC-RDF
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Gradivo je del revije

Naslov:npj genomic medicine
Skrajšan naslov:npj genom. med.
Založnik:Nature Publishing Group
ISSN:2056-7944
COBISS.SI-ID:525632281 Novo okno

Gradivo je financirano iz projekta

Financer:Drugi - Drug financer ali več financerjev
Številka projekta:U3
Naslov:Projekt DEAL

Licence

Licenca:CC BY 4.0, Creative Commons Priznanje avtorstva 4.0 Mednarodna
Povezava:http://creativecommons.org/licenses/by/4.0/deed.sl
Opis:To je standardna licenca Creative Commons, ki daje uporabnikom največ možnosti za nadaljnjo uporabo dela, pri čemer morajo navesti avtorja.

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