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Title:Increased burden of rare variants in GWAS associated genes in familial multiple sclerosis
Authors:ID Turk, Aleksander (Author)
ID Maver, Aleš (Author)
ID Juvan, Peter (Author)
ID Drulović, Jelena (Author)
ID Mesaros, Sarlota (Author)
ID Novaković, Ivana (Author)
ID Starčević-Čizmarević, Nada (Author)
ID Ristić, Smiljana (Author)
ID Stanković Matić, Ivana (Author)
ID Peterlin, Borut (Author)
Files:.pdf PDF - Presentation file, download (1,24 MB)
MD5: D85EDF0FB041FAE8363DA3CF62846258
 
URL URL - Source URL, visit https://www.nature.com/articles/s41598-025-04741-7
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo UKC LJ - Ljubljana University Medical Centre
Abstract:Multiple sclerosis (MS) is an immune-mediated neurodegenerative disease affecting the central nervous system with many known genetic risk factors. Although genome-wide association studies (GWAS) have identified common genetic variants with small effects associated with MS, the role of rare variants with large effects in MS aetiology remains underexplored. We hypothesized that rare variants in MS-associated genes from GWAS studies (GWAS-associated genes) are more likely to contribute to familial MS (FMS) risk than to sporadic MS (SMS). Therefore, we aimed to assess the burden of rare, predicted pathogenic (RPP) variants in GWAS-associated genes in FMS and SMS patients compared to controls. Rare genetic variants in 111 GWAS-associated genes were assessed in 87 FMS, 89 SMS and 3866 control cases. We demonstrate that RPP variants were significantly overrepresented in the FMS cohort whereas their frequency was not increased in the SMS cohort compared to controls (p-values 5.27 × 10− 74 and 1.00, respectively). Six genes (ALPK2, ANKRD55, INTS8, IQCB1, JADE2, and MALT1) significantly contributed to the burden of RPP in the FMS group. We conclude that rare variants in genes identified by GWAS might contribute to the genetic predisposition of familial MS patients.
Keywords:multiple sclerosis, burden analysis, whole exome sequencing (WES), rare variants, rare pathological changes, candidate genes
Publication status:Published
Publication version:Version of Record
Year of publishing:2025
Number of pages:6 str.
Numbering:Vol. 15, article no. ǂ21200
PID:20.500.12556/DiRROS-24103 New window
UDC:616.832-004
ISSN on article:2045-2322
DOI:10.1038/s41598-025-04741-7 New window
COBISS.SI-ID:241991939 New window
Note:Nasl. z nasl. zaslona; Opis vira z dne 9. 7. 2025;
Publication date in DiRROS:12.11.2025
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Downloads:72
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Record is a part of a journal

Title:Scientific reports
Shortened title:Sci. rep.
Publisher:Nature Publishing Group
ISSN:2045-2322
COBISS.SI-ID:18727432 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P3-0326-2020
Name:Ginekologija in reprodukcija: Genomika za personalizirano medicino

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P4-0220-2020
Name:Primerjalna genomika in genomska biodiverziteta

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License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
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