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Title:Thiol-reactive or redox-active : revising a repurposing screen led to a new invalidation pipeline and identified a true noncovalent inhibitor against papain-like protease from SARS-CoV-2
Authors:ID Kuzikov, Maria (Author)
ID Morasso, Stefano (Author)
ID Reinshagen, Jeanette (Author)
ID Wolf, Markus (Author)
ID Monaco, Vittoria (Author)
ID Cozzolino, Flora (Author)
ID Golič Grdadolnik, Simona (Author)
ID Šket, Primož (Author)
ID Plavec, Janez (Author)
ID Iaconis, Daniela (Author)
Files:URL URL - Source URL, visit https://pubs.acs.org/doi/epdf/10.1021/acsptsci.4c00325
 
.pdf PDF - Presentation file, download (1,73 MB)
MD5: CFFE6BC29B0ECC881928D89D786DC1EB
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo KI - National Institute of Chemistry
Abstract:The SARS-CoV-2 papain-like protease PLpro has multiple roles in the viral replication cycle, related to both its polypeptide cleavage function and its ability to antagonize the host immune response. Targeting the PLpro function is recognized as a promising mechanism to modulate viral replication, while supporting host immune responses. However, the development of PLpro-specific inhibitors remains challenging. Comprehensive investigations utilizing enzymatic, binding studies, and cellular assays revealed the previously reported inhibitors to act in an unspecific manner. At present, GRL-0617 and its derivatives remain the best-validated compounds with demonstrated antiviral activity in cells and in mouse models. In this study, we refer to the pitfalls of the redox sensitivity of PLpro. Using a screening-based approach to identify inhibitors of PLpro’s proteolytic activity, we made extensive efforts to validate active compounds over a range of conditions and readouts, emphasizing the need for comprehensive orthogonal data when profiling putative PLpro inhibitors. The remaining active compound, CPI-169, was shown to be a noncovalent inhibitor capable of competing with GRL-0617 in NMR-based experiments, suggesting that it occupied a similar binding site and inhibited viral replication in Vero-E6 cells, opening new design opportunities for further development as antiviral agents.
Keywords:SARS-CoV-2, drug repurposing, papain-like protease, redox, STD-NMR, CPI-169, GRL-0617
Publication status:Published
Publication version:Version of Record
Publication date:10.01.2025
Year of publishing:2025
Number of pages:str. 66–77
Numbering:Vol. 8, iss. 1
PID:20.500.12556/DiRROS-23338 New window
UDC:577
ISSN on article:2575-9108
DOI:10.1021/acsptsci.4c00325 New window
COBISS.SI-ID:213383683 New window
Copyright:© 2024 The Authors. Published by American Chemical Society
Note:Nasl. z nasl. zaslona; Opis vira z dne 10. 1. 2025;
Publication date in DiRROS:20.08.2025
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Downloads:160
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Record is a part of a journal

Title:ACS pharmacology & translational science
Shortened title:ACS pharmacol. transl. sci.
Publisher:American Chemical Society
ISSN:2575-9108
COBISS.SI-ID:6772762 New window

Document is financed by a project

Funder:EC - European Commission
Funding programme:H2020
Project number:101003551
Name:EXaSCale smArt pLatform Against paThogEns for Corona Virus
Acronym:EXSCALATE4CoV

Funder:EC - European Commission
Funding programme:HE
Project number:101137192
Name:Antiviral Therapeutics for Rapid Response Against Pandemic Infectious Diseases
Acronym:AVITHRAPID

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0242
Name:Kemija in struktura bioloških učinkovin

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0010
Name:Folding in dinamika biomolekularnih sistemov

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-4400
Name:Vrednotenje prehodnih stanj proteinov

Funder:CERIC-ERIC - Central European Research Infrastructure Consortium
Name:INTEGRA – The first step to enhance CERIC’s life science capabilities

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:biokemija, SARS-CoV-2, ponovna uporaba, zdravila


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