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Title:Fifty Aureobasidium pullulans genomes reveal a recombining polyextremotolerant generalist
Authors:ID Gostinčar, Cene (Author)
ID Turk, Martina (Author)
ID Zajc, Janja (Author)
ID Gunde-Cimerman, Nina (Author)
Files:URL URL - Source URL, visit https://doi.org/10.1111/1462-2920.14693
 
.pdf PDF - Presentation file, download (1,09 MB)
MD5: C95B2FF28E62084A44D22064A2D84360
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:The black yeast Aureobasidium pullulans is a textbook example of a generalistic and ubiquitous fungus thriving in a wide variety of environments. To investigate whether A. pullulans is a true generalist, or alternatively, whether part of its versatility can be attributed to intraspecific specialization masked by cryptic diversification undetectable by traditional phylogenetic analyses, we sequenced and analysed the genomes of 50 strains of A. pullulans from different habitats and geographic locations. No population structure was observed in the sequenced strains. Decay of linkage disequilibrium over shorter physical distances (<100 bp) than in many sexually reproducing fungi indicates a high level of recombination in the species. A homothallic mating locus was found in all of the sequenced genomes. Aureobasidium pullulans appears to have a homogeneous population genetics structure, which is best explained by good dispersal and high levels of recombination. This means that A. pullulans is a true generalist that can inhabit different habitats without substantial specialization to any of these habitats at the genomic level. Furthermore, in the future, the high level of A. pullulans recombination can be exploited for the identification of genomic loci that are involved in the many biotechnologically useful traits of this black yeast.
Keywords:black yeast, genome
Publication status:Published
Publication version:Version of Record
Publication date:01.10.2019
Year of publishing:2019
Number of pages:str. 3638-3652
Numbering:Vol. 21, iss. 10
PID:20.500.12556/DiRROS-19587 New window
UDC:577.21
ISSN on article:1462-2912
DOI:10.1111/1462-2920.14693 New window
COBISS.SI-ID:5158991 New window
Publication date in DiRROS:24.07.2024
Views:194
Downloads:139
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Record is a part of a journal

Title:Environmental microbiology
Shortened title:Environ. microbiol.
Publisher:Blackwell Science
ISSN:1462-2912
COBISS.SI-ID:626197 New window

Document is financed by a project

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0170-2018
Name:Molekulski mehanizmi uravnavanja celičnih procesov v povezavi z nekaterimi boleznimi pri človeku

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0207-2015
Name:Toksini in biomembrane

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:Z7-7436-2016
Name:Na stres tolerantne kvasovke iz rodu Aureobasidium: uporaba v biološki kontroli nekaterih rastlinskih bolezni

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License:CC BY-NC-ND 4.0, Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Link:http://creativecommons.org/licenses/by-nc-nd/4.0/
Description:The most restrictive Creative Commons license. This only allows people to download and share the work for no commercial gain and for no other purposes.

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