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Title:Natural variation in Arabidopsis thaliana rosette area unveils new genes involved in plant development
Authors:ID Brigatti, Edgardo (Author)
ID González, Rubén (Author)
ID Butković, Anamarija (Author)
ID Rivarez, Mark Paul Selda (Author)
ID Elena, Santiago F. (Author)
Files:URL URL - Source URL, visit https://www.nature.com/articles/s41598-020-74723-4
 
.pdf PDF - Presentation file, download (2,45 MB)
MD5: B383D695372B82FB1C013AA40504B2D3
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:Growth is a complex trait influenced by multiple genes that act at different moments during the development of an organism. This makes it difficult to spot its underlying genetic mechanisms. Since plant growth is intimately related to the effective leaf surface area (ELSA), identifying genes controlling this trait will shed light on our understanding of plant growth. To find new genes with a significant contribution to plant growth, here we used the natural variation in Arabidopsis thaliana to perform a genome-wide association study of ELSA. To do this, the projected rosette area of 710 worldwide distributed natural accessions was measured and analyzed using the genome-wide efficient mixed model association algorithm. From this analysis, ten genes were identified having SNPs with a significant association with ELSA. To validate the implication of these genes into A. thaliana growth, six of them were further studied by phenotyping knock-out mutant plants. It was observed that rem1.2, orc1a, ppd1, and mcm4 mutants showed different degrees of reduction in rosette size, thus confirming the role of these genes in plant growth. Our study identified genes already known to be involved in plant growth but also assigned this role, for the first time, to other genes.
Publication status:Published
Publication version:Version of Record
Publication date:19.10.2020
Year of publishing:2020
Number of pages:str. 1-10
Numbering:Vol. 10
PID:20.500.12556/DiRROS-19553 New window
UDC:60
ISSN on article:2045-2322
DOI:10.1038/s41598-020-74723-4 New window
COBISS.SI-ID:59829251 New window
Note:Nasl. z nasl. zaslona; Št. članka: 17600; Soavtorji: Anamarija Butković, Mark Paul Selda Rivarez, Santiago F. Elena; Opis vira z dne 15. 4. 2021;
Publication date in DiRROS:23.07.2024
Views:310
Downloads:194
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Record is a part of a journal

Title:Scientific reports
Shortened title:Sci. rep.
Publisher:Nature Publishing Group
ISSN:2045-2322
COBISS.SI-ID:18727432 New window

Document is financed by a project

Funder:Other - Other funder or multiple funders
Funding programme:Spain’s Ministerio de Ciencia e Innovación-FEDER
Project number:PID2019-103998GB-I00

Funder:Other - Other funder or multiple funders
Funding programme:Generalitat Valenciana Grants
Project number:GRISOLIA/2018/005 and PROMETEU2019/012

Funder:Other - Other funder or multiple funders
Funding programme:Ministerio de Ciencia e Innovación-FEDER
Project number:BES-2016-077078

Funder:Other - Other funder or multiple funders
Funding programme:Universitat de València International 0.7 Cooperation Program
Name:oung Investigators fellowship

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:biotehnologija, rastline, rast, genetika


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