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Title:Digital PCR method for detection and quantification of specific antimicrobial drug-resistance mutations in human cytomegalovirus
Authors:ID Bogožalec Košir, Alexandra (Author)
ID Cvelbar, Tašja (Author)
ID Kammel, Martin (Author)
ID Grunert, Hans-Peter (Author)
ID Zeichhardt, Heinz (Author)
ID Milavec, Mojca (Author)
Files:.pdf PDF - Presentation file, download (5,71 MB)
MD5: 54FD3DB85846B646F8A56CCC86F678DC
 
URL URL - Source URL, visit https://doi.org/10.1016/j.jviromet.2020.113864
 
Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:Antimicrobial drug resistance is one of the biggest threats to human health worldwide. Timely detection and quantification of infectious agents and their susceptibility to antimicrobial drugs are crucial for efficient management of resistance to antiviral drugs. In clinical settings, viral drug resistance is most often associated with prolonged treatment of chronic infections, and assessed by genotyping methods; e.g., sequencing and PCR. These approaches have limitations: sequencing can be expensive and does not provide quantification; and qPCR quantification is hampered by a lack of reference materials for standard curves. In recent years, digital PCR has been introduced, which provides absolute quantification without the need for reference materials for standard curves. Using digital PCR, we have developed a rapid, sensitive and accurate method for genotyping and quantification of the most prevalent mutations that cause human cytomegalovirus resistance to ganciclovir.
Keywords:digital PCR, antimicrobial-drug resistance, HCMV, polymerase chain reaction, viruses
Publication status:Published
Publication version:Version of Record
Publication date:01.07.2020
Year of publishing:2020
Number of pages:str. 1-16
Numbering:Vol. 281, [article] 113864
PID:20.500.12556/DiRROS-19515 New window
UDC:577
ISSN on article:0166-0934
DOI:10.1016/j.jviromet.2020.113864 New window
COBISS.SI-ID:15879683 New window
Publication date in DiRROS:22.07.2024
Views:302
Downloads:215
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Record is a part of a journal

Title:Journal of virological methods
Shortened title:J. virol. methods
Publisher:Elsevier/North-Holland
ISSN:0166-0934
COBISS.SI-ID:25810432 New window

Document is financed by a project

Funder:Other - Other funder or multiple funders
Funding programme:EMPIR project

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:protimikrobna rezistenca, HCMV, verižna reakcija s polimerazo, virusi


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