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Title:Epidemiology of Flavescence dorée and hazelnut decline in Slovenia : geographical distribution and genetic diversity of the associated 16SrV phytoplasmas
Authors:ID Kogej Zwitter, Zala (Author)
ID Seljak, Gabrijel (Author)
ID Jakomin, Tjaša (Author)
ID Brodarič, Jakob (Author)
ID Vučurović, Ana (Author)
ID Pedemay, Sandra (Author)
ID Salar, Pascal (Author)
ID Malembic-Maher, Sylvie (Author)
ID Foissac, Xavier (Author)
ID Mehle, Nataša (Author)
Files:URL URL - Source URL, visit https://doi.org/10.3389/fpls.2023.1261658
 
URL URL - Source URL, visit https://doi.org/10.3389/fpls.2023.1217425
 
URL URL - Source URL, visit https://www.frontiersin.org/articles/10.3389/fpls.2023.1217425/full#supplementary-material
 
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Language:English
Typology:1.01 - Original Scientific Article
Organization:Logo NIB - National Institute of Biology
Abstract:Flavescence dorée (FD) phytoplasma from 16SrV-C and -D subgroups cause severe damage to grapevines throughout Europe. This phytoplasma is transmitted from grapevine to grapevine by the sap-sucking leafhopper Scaphoideus titanus. European black alder and clematis serve as perennial plant reservoirs for 16SrV-C phytoplasma strains, and their host range has recently been extended to hazelnuts. In Slovenia, hazelnut orchards are declining due to 16SrV phytoplasma infections, where large populations of the non-autochthonous leafhopper Orientus ishidae have been observed. To better characterise the phytoplasma-induced decline of hazelnut and possible transmission fluxes between these orchards and grapevine, genetic diversity of 16SrV phytoplasmas in grapevine, hazelnut and leafhoppers was monitored from 2017 to 2022. The nucleotide sequence analysis was based on the map gene. The most prevalent map genotype in grapevine in all wine-growing regions of Slovenia was M54, which accounted for 84 % of the 176 grapevines tested. Besides M54, other epidemic genotypes with lower frequency were M38 (6 %), M51 (3 %), M50 (2 %) and M122 (1 %). M38, M50 and M122 were also detected in infected cultivated hazelnuts and in specimens of O. ishidae leafhopper caught in declining hazelnut orchards. It suggests that this polyphagous vector could be responsible for phytoplasma infection in hazelnut orchards and possibly for some phytoplasma exchanges between hazelnuts and grapevine. We hereby describe new genotypes: M158 in grapevine as well as four never reported genotypes M159 to M162 in hazelnut. Of these four genotypes in hazelnut, one (M160) was also detected in O. ishidae. Analysis of additional genes of the new genotypes allowed us to assign them to the VmpA-III cluster, which corresponds to the 16SrV-C strains previously shown to be compatible with S. titanus transmission.
Keywords:phytoplasmas, haselnuts, grapevine, Flavescence dorée, epidemiology, plant disease
Publication status:Published
Publication version:Version of Record
Publication date:04.07.2023
Year of publishing:2023
Number of pages:str. 1-12
Numbering:Vol. 14, [art.] 1217425
PID:20.500.12556/DiRROS-16723-0d415d85-90b9-5532-10fe-a76a0105e156 New window
UDC:632
ISSN on article:1664-462X
COBISS.SI-ID:159155203 New window
Note:Soavtorji: Gabrijel Seljak, Tjaša Jakomin, Jakob Brodarič, Ana Vučurović, Sandra Pedemay, Pascal Salar, Sylvie Malembic-Maher, Xavier Foissac and Nataša Mehle; Nasl. z nasl. zaslona; Opis vira z dne 18. 7. 2023;
Publication date in DiRROS:26.07.2023
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Downloads:623
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Record is a part of a journal

Title:Frontiers in plant science
Shortened title:Front. plant sci.
Publisher:Frontiers Research Foundation
ISSN:1664-462X
COBISS.SI-ID:3011663 New window

Document is financed by a project

Funder:ARRS - Slovenian Research Agency
Project number:L7-2632-2020
Name:Nanopore visokozmogljivo sekvenciranje mikrobnih genomov za razrešitev epidemioloških in diagnostičnih vprašanj v rastlinski patologiji

Funder:ARRS - Slovenian Research Agency
Project number:P4-0165-2022
Name:Biotehnologija in sistemska biologija rastlin

Funder:ARIS - Slovenian Research and Innovation Agency
Funding programme:mladi raziskovalci
Project number:52082

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Latin
Title:Epidemiology of Flavescence dorée and hazelnut decline in Slovenia: geographical distribution and genetic diversity of the associated 16SrV phytoplasmas
Keywords:fitoplazme, leska, trta, zlata trsna rumenica, bolezni vinske trte, rastlinske bolezni, Vitis vinifera, Corylus avellana


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