| Title: | Using genomic information for management planning of an endangered perennial, Viola uliginosa |
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| Authors: | ID Lee, Kyung Min (Author)
ID Ranta, Pertti (Author)
ID Saarikivi, Jarmo (Author)
ID Kutnar, Lado, 1-006 (Author)
ID Vreš, Branko (Author)
ID Dzhus, Maxim (Author)
ID Mutanen, Marko (Author)
ID Kvist, Laura (Author) |
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| Files: |  URL - Presentation file, visit https://dirros.openscience.si/IzpisGradiva.php?id=14728
 PDF - Presentation file, download (1,49 MB)
MD5: 1C4A6A1691FA2A0A6588E58F5A84F893
URL - Source URL, visit https://doi.org/10.1002/ece3.6093
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| Language: | English |
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| Typology: | 1.01 - Original Scientific Article |
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| Organization: |  SciVie - Slovenian Forestry Institute
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| Abstract: | Species occupying habitats subjected to frequent natural and/or anthropogenic changes are a challenge for conservation management. We studied one such species, Viola uliginosa, an endangered perennial wetland species typically inhabiting sporadi-cally flooded meadows alongside rivers/lakes. In order to estimate genomic diversity, population structure, and history, we sampled five sites in Finland, three in Estonia, and one each in Slovenia, Belarus, and Poland using genomic SNP data with double-digest restriction site-associated DNA sequencing (ddRAD-seq). We found mono-phyletic populations, high levels of inbreeding (mean population FSNP = 0.407-0.945), low effective population sizes (Ne = 0.8-50.9), indications of past demographic ex-pansion, and rare long-distance dispersal. Our results are important in implementing conservation strategies for V. uliginosa, which should include founding of seed banks, ex situ cultivations, and reintroductions with individuals of proper origin, combined with continuous population monitoring and habitat management. |
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| Keywords: | nature conservation, demography, genomic diversity, population genomics, RAD sequencing, Viola |
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| Publication status: | Published |
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| Publication version: | Version of Record |
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| Year of publishing: | 2020 |
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| Number of pages: | str. 2638-2649 |
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| Numbering: | Vol. 10, iss. 5 |
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| PID: | 20.500.12556/DiRROS-14728  |
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| UDC: | 58 |
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| ISSN on article: | 2045-7758 |
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| DOI: | 10.1002/ece3.6093 |
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| COBISS.SI-ID: | 5631142 |
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| Note: | Nasl. iz nasl. zaslona;
Opis vira z dne 18. 2. 2020;
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| Publication date in DiRROS: | 20.01.2022 |
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| Views: | 1245 |
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| Downloads: | 971 |
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| Metadata: |    |
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