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Iskalni niz: "ključne besede" (ecology) .

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1.
Annual recurrence of prokaryotic climax communities in shallow waters of the North Mediterranean
Mauro Celussi, Vincenzo Manna, Elisa Banchi, Viviana Fonti, Matteo Bazzaro, Vesna Flander-Putrle, Katja Klun, Martina Kralj, Neža Orel, Tinkara Tinta, 2024, izvirni znanstveni članek

Povzetek: In temperate coastal environments, wide fluctuations of biotic and abiotic factors drive microbiome dynamics. To link recurrent ecological patterns with planktonic microbial communities, we analysed a monthly-sampled 3-year time series of 16S rRNA amplicon sequencing data, alongside environmental variables, collected at two stations in the northern Adriatic Sea. Time series multivariate analyses allowed us to identify three stable, mature communities (climaxes), whose recurrence was mainly driven by changes in photoperiod and temperature. Mixotrophs (e.g., Ca. Nitrosopumilus, SUP05 clade, and Marine Group II) thrived under oligotrophic, low-light conditions, whereas copiotrophs (e.g., NS4 and NS5 clades) bloomed at higher temperatures and substrate availability. The early spring climax was characterised by a more diverse set of amplicon sequence variants, including copiotrophs associated with phytoplankton-derived organic matter degradation, and photo-auto/heterotrophic organisms (e.g., Synechococcus sp., Roseobacter clade), whose rhythmicity was linked to photoperiod lengthening. Through the identification of recurrent climax assemblages, we begin to delineate a typology of ecosystem based on microbiome composition and functionality, allowing for the intercomparison of microbial assemblages among different biomes, a still underachieved goal in the omics era.
Ključne besede: marine microbial ecology, coastal seas, microbial community analyses, marine biology, marine ecology
Objavljeno v DiRROS: 17.05.2024; Ogledov: 19; Prenosov: 9
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2.
Lizard host abundances and climatic factors explain phylogenetic diversity and prevalence of blood parasites on an oceanic island
Rodrigo Megía-Palma, Gemma Palomar, Javier Martínez, Bernardo Antunes, Katarzyna Dudek, Anamarija Žagar, Nina Guerra Serén, Miguel A. Carretero, Wiesław Babik, Santiago Merino, 2024, izvirni znanstveni članek

Povzetek: Host abundance might favour the maintenance of a high phylogenetic diversity of some parasites via rapid transmission rates. Blood parasites of insular lizards represent a good model to test this hypothesis because these parasites can be particularly prevalent in islands and host lizards highly abundant. We applied deep amplicon sequencing and analysed environmental predictors of blood parasite prevalence and phylogenetic diversity in the endemic lizard Gallotia galloti across 24 localities on Tenerife, an island in the Canary archipelago that has experienced increasing warming and drought in recent years. Parasite prevalence assessed by microscopy was over 94%, and a higher proportion of infected lizards was found in warmer and drier locations. A total of 33 different 18s rRNA parasite haplotypes were identified, and the phylogenetic analyses indicated that they belong to two genera of Adeleorina (Apicomplexa: Coccidia), with Karyolysus as the dominant genus. The most important predictor of between-locality variation in parasite phylogenetic diversity was the abundance of lizard hosts. We conclude that a combination of climatic and host demographic factors associated with an insular syndrome may be favouring a rapid transmission of blood parasites among lizards on Tenerife, which may favour the maintenance of a high phylogenetic diversity of parasites.
Ključne besede: Canary Islands, climate change, next-generation sequencing, phylogenetic analyses, zoology, ecology
Objavljeno v DiRROS: 16.05.2024; Ogledov: 32; Prenosov: 20
.pdf Celotno besedilo (1,76 MB)
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3.
Hydrogeological characterization of karst springs of the white (Proteus anguinus anguinus) and black olm (Proteus anguinus parkelj) habitat in Bela krajina (SE Slovenia)
Katja Koren, Rok Brajkovič, 2023, izvirni znanstveni članek

Povzetek: The springs west of Črnomelj, in SE Slovenia, are the habitat of the black (Proteus anguinus parkelj) and the white olm (Proteus anguinus anguinus). Some of these springs are also the only known habitat in the world of endemic species of black olm. A steady decline in olm populations has been observed in this area over the past decades. Owing to the rapid runoff and groundwater flow high-resolution monitoring is essential in providing better insight into the hydrogeological characterization of the catchment area of springs. Specific factors and critical parameters of water behind said olm degradation have not yet been defined. Because the olm’s environment is largely aquatic, one potential critical parameter could be the higher water temperatures (>12 °C) or higher nitrate concentration (>9.2mg/l). The six-month observation of the springs (July – December 2021) point to water temperature as a potential critical parameter since the water temperature of the springs exceeded 12 °C in months July and August. Nitrate concentrations could also be a second critical parameter in the degradation of the olm’s habitat. Maximum nitrate concentrations above 9.2mg/l throughout much of the observation period (except for Dobličica spring). Due to less agricultural activity in December in the spring catchment area and a higher dilution rate due to reduced evapotranspiration and increased effective precipitation during this time of the year, the nitrate concentrations are decreased. The results of the measured parameters of groundwater could show the hydrogeological connection between the Otovski and Pački breg springs and between Šotor, Jamnice and Dobličica. The Obršec spring has an independent catchment area. A detailed estimation of the springs catchment area is possible due to a detailed geologic map. It is necessary to determine the origin of the nitrate (nitrate isotope analysis), to quantify the threshold values of the critical parameters, to define precisely all the causes of the olm deterioration, and to make proposals for appropriate measures to limit or even stop the decline of the olm population.
Ključne besede: hydrogeology, olm, ecology, nitrate, monitoring
Objavljeno v DiRROS: 16.01.2024; Ogledov: 199; Prenosov: 67
.pdf Celotno besedilo (13,65 MB)

4.
Accounting for cloud cover and circannual variation puts the effect of lunar phase on deer–vehicle collisions into perspective
Jacopo Cerri, Laura Stendardi, Elena Bužan, Boštjan Pokorny, 2023, izvirni znanstveni članek

Povzetek: Although several studies have focused on the influence of moonlight on deer–vehicle collisions, findings have been inconsistent. This may be due to neglect of the effects of cloud cover, a major impediment to moon illumination and circannual variation in both deer and human activity. We assessed how median cloud cover interacted with the illuminated fraction of the moon in affecting daily roe deer (Capreolus capreolus) roadkill in Slovenia (Central Europe). Data included nationwide roadkill (n = 49,259), collected between 2010 and 2019 by hunters, as required by law. Roadkill peaked under medium to high cloud cover and decreased during nights with low or extremely high cloudiness. This pattern was more pronounced on nights with a full moon. However, the effects of moon illumination and cloud cover had a lower predictive potential than circannual variation, as collisions clearly peaked in April/May, July and August/September. Our results suggest that moonlight could influence roe deer movements through compensatory foraging. However, on nights with a full moon, collisions could also be affected by weather. On bright nights, roe deer might be less active due to increased human presence and sustained vehicular traffic. Then, with medium to high cloud cover and also rainfall, human presence in the environment may be low enough to increase deer movements, but vehicular traffic can still be intermediate, maximizing the risk of collisions. Finally, with overcast skies, widespread rainfall can reduce both traffic volume and human outdoor activity, decreasing the risk of collisions. Moon illumination may indeed affect wildlife–vehicle collisions and roadkill, but its effects should be quantified as a function of cloud cover. Moreover, to make studies truly comparable, research about wildlife–vehicle collisions should also account for time of the year. Policy implications. Because collisions with roe deer peak at particular periods of the year, signs should be installed seasonally. By doing so, they would warn drivers about the risk, improve drivers' awareness and increase their safety. Moreover, as collisions also increase on nights with a full moon and overcast skies, interactive warning signs that are activated by ground illumination should also be useful.
Ključne besede: cloudiness, MODIS Surface Reflectance, moon, road ecology, roe deer, Slovenia, thin-plate splines, wildlife–vehicle collisions
Objavljeno v DiRROS: 16.11.2023; Ogledov: 381; Prenosov: 168
.pdf Celotno besedilo (4,25 MB)
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Jet stream position explains regional anomalies in European beech forest productivity and tree growth
Isabel Dorado Liñán, Blanca Ayarzagüena, Flurin Babst, Guobao Xu, Luis Gil, Giovanna Battipaglia, Allan Buras, Vojtěch Čada, Jesús J. Camarero, Liam Cavin, Tom Levanič, Peter Prislan, 2022, izvirni znanstveni članek

Povzetek: The mechanistic pathways connecting ocean-atmosphere variability and terrestrial productivity are well-established theoretically, but remain challenging to quantify empirically. Such quantification will greatly improve the assessment and prediction of changes in terrestrial carbon sequestration in response to dynamically induced climatic extremes. The jet stream latitude (JSL) over the North Atlantic-European domain provides a synthetic and robust physical framework that integrates climate variability not accounted for by atmospheric circulation patterns alone. Surface climate impacts of north-south summer JSL displacements are not uniform across Europe, but rather create a northwestern-southeastern dipole in forest productivity and radial-growth anomalies. Summer JSL variability over the eastern North Atlantic-European domain (5-40E) exerts the strongest impact on European beech, inducing anomalies of up to 30% in modelled gross primary productivity and 50% in radial tree growth. The net effects of JSL movements on terrestrial carbon fluxes depend on forest density, carbon stocks, and productivity imbalances across biogeographic regions.
Ključne besede: atmospheric dynamics, climate-change ecology, climate-change impacts, environmental impact
Objavljeno v DiRROS: 20.04.2022; Ogledov: 783; Prenosov: 642
.pdf Celotno besedilo (3,68 MB)
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