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Query: "author" (Margarita L%C3%B3pez-Trascasa) .

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Evaluation of parallel hierarchical differential evolution for min-max optimization problems using SciPy
Margarita Antoniou, Gregor Papa, 2022, published scientific conference contribution

Keywords: min-max optimization, parallelization, differential evolution, SciPy
Published in DiRROS: 19.05.2023; Views: 273; Downloads: 147
.pdf Full text (1,39 MB)
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3.
Optimisation techniques under uncertainty
Margarita Antoniou, Thomas Krak, Alexander Erreygers, Jasper De Bock, Gert De Cooman, 2019, published scientific conference contribution abstract

Keywords: Markov chains, evolutionary algorithms, limit expectations
Published in DiRROS: 18.05.2023; Views: 265; Downloads: 71
.pdf Full text (555,72 KB)

4.
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On suitability of the customized measuring device for electric motor
Rok Hribar, Gašper Petelin, Margarita Antoniou, Anton Biasizzo, Stane Ciglarič, Gregor Papa, 2022, published scientific conference contribution

Published in DiRROS: 13.12.2022; Views: 456; Downloads: 166
.pdf Full text (249,35 KB)

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Dynamic computational resource allocation for CFD simulations based on pareto front optimization
Gašper Petelin, Margarita Antoniu, Gregor Papa, 2022, published scientific conference contribution

Published in DiRROS: 15.09.2022; Views: 517; Downloads: 170
.pdf Full text (878,54 KB)

8.
SERPING1 variants and C1-INH biological function : a close relationship with C1-INH-HAE
Christian Drouet, Alberto López Lera, Arije Ghannam, Margarita López-Trascasa, Sven Cichon, Denise Ponard, Faidra Parsopoulou, Hana Grombirikova, Tomas Freiberger, Matija Rijavec, Camila Lopes Veronez, João Bosco Pesquero, Anastasios E. Germenis, 2022, review article

Abstract: Hereditary angioedema with C1 Inhibitor deficiency (C1-INH-HAE) is caused by a constellation of variants of the SERPING1 gene (n = 809; 1,494 pedigrees), accounting for 86.8% of HAE families, showing a pronounced mutagenic liability of SERPING1 and pertaining to 5.6% de novo variants. C1-INH is the major control serpin of the kallikrein–kinin system (KKS). In addition, C1-INH controls complement C1 and plasminogen activation, both systems contributing to inflammation. Recognizing the failed control of C1s protease or KKS provides the diagnosis of C1-INH-HAE. SERPING1 variants usually behave in an autosomal-dominant character with an incomplete penetrance and a low prevalence. A great majority of variants (809/893; 90.5%) that were introduced into online database have been considered as pathogenic/likely pathogenic. Haploinsufficiency is a common feature in C1-INH-HAE where a dominant-negative variant product impacts the wild-type allele and renders it inactive. Small (36.2%) and large (8.3%) deletions/duplications are common, with exon 4 as the most affected one. Point substitutions with missense variants (32.2%) are of interest for the serpin structure–function relationship. Canonical splice sites can be affected by variants within introns and exons also (14.3%). For noncanonical sequences, exon skipping has been confirmed by splicing analyses of patients' blood-derived RNAs (n = 25). Exonic variants (n = 6) can affect exon splicing. Rare deep-intron variants (n = 6), putatively acting as pseudo-exon activating mutations, have been characterized as pathogenic. Some variants have been characterized as benign/likely benign/of uncertain significance (n = 74). This category includes some homozygous (n = 10) or compound heterozygous variants (n = 11). They are presenting with minor allele frequency (MAF) below 0.00002 (i.e., lower than C1-INH-HAE frequency), and may be quantitatively unable to cause haploinsufficiency. Rare benign variants could contribute as disease modifiers. Gonadal mosaicism in C1-INH-HAE is rare and must be distinguished from a de novo variant. Situations with paternal or maternal disomy have been recorded (n = 3). Genotypes must be interpreted with biological investigation fitting with C1-INH expression and typing. Any SERPING1 variant reminiscent of the dysfunctional phenotype of serpin with multimerization or latency should be identified as serpinopathy.
Keywords: Hereditary angioedemas -- genetics -- diagnosis, genetic variation, serpins, SERPING1 gene, C1-INH, C1-INH-HAE, C1 inhibitor, serpinopathy
Published in DiRROS: 06.04.2022; Views: 862; Downloads: 523
.pdf Full text (2,51 MB)
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9.
Solving pessimistic bilevel optimization problems with evolutionary algorithms
Margarita Antoniou, Gregor Papa, 2021, published scientific conference contribution

Published in DiRROS: 22.09.2021; Views: 1057; Downloads: 347
.pdf Full text (318,67 KB)

10.
Preferred solutions of the ground station scheduling problem using NSGA-III weighted reference points selection
Margarita Antoniou, Gašper Petelin, Gregor Papa, 2021, published scientific conference contribution

Published in DiRROS: 22.09.2021; Views: 1008; Downloads: 489
.pdf Full text (4,10 MB)

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