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Iskalni niz: "ključne besede" (plus trees) .

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1.
Maker-Breaker domination game on trees when Staller wins
Csilla Bujtás, Pakanun Dokyeesun, Sandi Klavžar, 2023, izvirni znanstveni članek

Povzetek: In the Maker-Breaker domination game played on a graph $G$, Dominator's goal is to select a dominating set and Staller's goal is to claim a closed neighborhood of some vertex. We study the cases when Staller can win the game. If Dominator (resp., Staller) starts the game, then $\gamma_{\rm SMB}(G)$ (resp., $\gamma_{\rm SMB}'(G)$) denotes the minimum number of moves Staller needs to win. For every positive integer $k$, trees $T$ with $\gamma_{\rm SMB}'(T)=k$ are characterized and a general upper bound on $\gamma_{\rm SMB}'$ is proved. Let $S = S(n_1,\dots, n_\ell)$ be the subdivided star obtained from the star with $\ell$ edges by subdividing its edges $n_1-1, \ldots, n_\ell-1$ times, respectively. Then $\gamma_{\rm SMB}'(S)$ is determined in all the cases except when $\ell\ge 4$ and each $n_i$ is even. The simplest formula is obtained when there are at least two odd $n_i$s. If ▫$n_1$▫ and $n_2$ are the two smallest such numbers, then $\gamma_{\rm SMB}'(S(n_1,\dots, n_\ell))=\lceil \log_2(n_1+n_2+1)\rceil$▫. For caterpillars, exact formulas for $\gamma_{\rm SMB}$ and for $\gamma_{\rm SMB}'$ are established.
Ključne besede: domination game, Maker-Breaker game, Maker-Breaker domination game, hypergraphs, trees, subdivided stars, caterpillars
Objavljeno v DiRROS: 08.04.2024; Ogledov: 76; Prenosov: 37
.pdf Celotno besedilo (255,58 KB)
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2.
Computational complexity aspects of super domination
Csilla Bujtás, Nima Ghanbari, Sandi Klavžar, 2023, izvirni znanstveni članek

Povzetek: Let ▫$G$▫ be a graph. A dominating set ▫$D\subseteq V(G)$▫ is a super dominating set if for every vertex ▫$x\in V(G) \setminus D$▫ there exists ▫$y\in D$▫ such that ▫$N_G(y)\cap (V(G)\setminus D)) = \{x\}$▫. The cardinality of a smallest super dominating set of ▫$G$▫ is the super domination number of ▫$G$▫. An exact formula for the super domination number of a tree ▫$T$▫ is obtained, and it is demonstrated that a smallest super dominating set of ▫$T$▫ can be computed in linear time. It is proved that it is NP-complete to decide whether the super domination number of a graph ▫$G$▫ is at most a given integer if ▫$G$▫ is a bipartite graph of girth at least ▫$8$▫. The super domination number is determined for all ▫$k$▫-subdivisions of graphs. Interestingly, in half of the cases the exact value can be efficiently computed from the obtained formulas, while in the other cases the computation is hard. While obtaining these formulas, II-matching numbers are introduced and proved that they are computationally hard to determine.
Ključne besede: super domination number, trees, bipartite graphs, k-subdivision of a graph, computational complexity, matching, II-matching number
Objavljeno v DiRROS: 14.03.2024; Ogledov: 82; Prenosov: 48
.pdf Celotno besedilo (453,39 KB)
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3.
General position polynomials
Vesna Iršič, Sandi Klavžar, Gregor Rus, James Tuite, 2024, izvirni znanstveni članek

Povzetek: A subset of vertices of a graph $G$ is a general position set if no triple of vertices from the set lie on a common shortest path in $G$. In this paper we introduce the general position polynomial as $\sum_{i \geq 0} a_i x^i$, where $a_i$ is the number of distinct general position sets of $G$ with cardinality $i$. The polynomial is considered for several well-known classes of graphs and graph operations. It is shown that the polynomial is not unimodal in general, not even on trees. On the other hand, several classes of graphs, including Kneser graphs $K(n,2)$, with unimodal general position polynomials are presented.
Ključne besede: general position set, general position number, general position polynomial, unimodality, trees, Cartesian product of graphs, Kneser graphs
Objavljeno v DiRROS: 28.02.2024; Ogledov: 98; Prenosov: 74
.pdf Celotno besedilo (384,07 KB)
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4.
Resolvability and convexity properties in the Sierpiński product of graphs
Michael A. Henning, Sandi Klavžar, Ismael G. Yero, 2024, izvirni znanstveni članek

Povzetek: Let $G$ and $H$ be graphs and let $f \colon V(G)\rightarrow V(H)$ be a function. The Sierpiński product of $G$ and $H$ with respect to $f$, denoted by $G \otimes _f H$, is defined as the graph on the vertex set $V(G)\times V(H)$, consisting of $|V(G)|$ copies of $H$; for every edge $gg'$ of $G$ there is an edge between copies $gH$ and $g'H$ of $H$ associated with the vertices $g$ and $g'$ of $G$, respectively, of the form $(g,f(g'))(g',f(g))$. The Sierpiński metric dimension and the upper Sierpiński metric dimension of two graphs are determined. Closed formulas are determined for Sierpiński products of trees, and for Sierpiński products of two cycles where the second factor is a triangle. We also prove that the layers with respect to the second factor in a Sierpiński product graph are convex.
Ključne besede: Sierpiński product of graphs, metric dimension, trees, convex subgraph
Objavljeno v DiRROS: 16.02.2024; Ogledov: 120; Prenosov: 54
.pdf Celotno besedilo (432,07 KB)
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5.
Between but not within-species variation in the distribution of fitness effects
Jennifer James, Chedly Kastallya, Katharina Budde, Santiago C. González-Martínez, Pascal Milesi, Tanja Pyhäjärvi, Martin Lascoux, 2023, izvirni znanstveni članek

Povzetek: New mutations provide the raw material for evolution and adaptation. The distribution of fitness effects (DFE) describes the spectrum of effects of new mutations that can occur along a genome, and is, therefore, of vital interest in evolutionary biology. Recent work has uncovered striking similarities in the DFE between closely related species, prompting us to ask whether there is variation in the DFE among populations of the same species, or among species with different degrees of divergence, that is whether there is variation in the DFE at different levels of evolution. Using exome capture data from six tree species sampled across Europe we characterized the DFE for multiple species, and for each species, multiple populations, and investigated the factors potentially influencing the DFE, such as demography, population divergence, and genetic background. We find statistical support for the presence of variation in the DFE at the species level, even among relatively closely related species. However, we find very little difference at the population level, suggesting that differences in the DFE are primarily driven by deep features of species biology, and those evolutionarily recent events, such as demographic changes and local adaptation, have little impact.
Ključne besede: DFE, deleterious mutations, population structure, forest trees
Objavljeno v DiRROS: 12.12.2023; Ogledov: 220; Prenosov: 94
.pdf Celotno besedilo (1,15 MB)
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6.
Use of an arboretum and DNA barcoding for the detection and identification of leaf-mining insects on alien woody plants
Natalia I. Kirichenko, Stanislav Gomboc, Barbara Piškur, Maarten De Groot, 2023, izvirni znanstveni članek

Povzetek: Arboreta serve as effective tools for identifying alien insect pests and novel trophic associations. In this study, we used an arboretum in Slovenia to survey woody plants and identify both alien and native leaf miners. The leaves and twigs of 50 woody plant species and their cultivars were examined for characteristic damage. We used an integrative approach that combined identification based on leaf mines and DNA barcoding of the larvae and pupae found in the mines. In total, 62 leaf-mining species were identified, including eight alien species, of which the heliozelid Coptodisca lucifluella (Clemens, 1860) and the agromyzid Cerodontha unisetiorbita Zlobin, 1992 were documented for Slovenia for the first time. Additionally, three presumably native Gracillariidae moths Phyllocnistis labyrinthella (Bjerkander, 1790), P. ramulicola Langmaid & Corley, 2007 and P. saligna (Zeller, 1839) represented the first record for Slovenia. Furthermore, we documented 23 novel-to-science trophic associations, 20 of which involved native insects and alien woody plants, primarily from Asia. This study highlights the importance of arboreta and botanical gardens for the interception of invasive alien insects and the early detection of trophic shifts of native insects to alien plants, which can aid in predicting their potential spread.
Ključne besede: botanical garden, sentinels, leaf miners, alien species, non-native trees, novel trophic associations, DNA barcoding, Slovenia
Objavljeno v DiRROS: 24.03.2023; Ogledov: 504; Prenosov: 230
.pdf Celotno besedilo (6,32 MB)
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7.
Timeline of autumn phenology in temperate deciduous trees
Inge Dox, Jožica Gričar, Lorène Julia Marchand, Sebastien Leys, Paolo Zuccarini, Charly Geron, Peter Prislan, Bertold Mariën, Patrick Fonti, Holger Lange, Josep Peñuelas, Jan Van den Bulcke, Matteo Campioli, 2020, izvirni znanstveni članek

Povzetek: Cessation of xylem formation or wood growth (CWG) and onset of foliar senescence (OFS) are key autumn phenological events in temperate deciduous trees. Their timing is fundamental for development and survival of trees, ecosystem nutrient cycling, the seasonal exchange of matter and energy between the biosphere and atmosphere and affect the impact and feedback of forests to global change. A large-scale experimental effort and improved observational methods have allowed us to compare the timing of CWG and OFS for different deciduous tree species in Western Europe, in particularly silver birch, a pioneer species, and European beech, a late-succession species, at stands of different latitudes, of different levels of site fertility, and for two years with contrasting meteorological and drought conditions i.e., the low-moderately dry 2017 and the extremely dry 2018. Specifically, we tested whether foliar senescence started before, after or concurrently with CWG. OFS and CWG occurred generally between late September and early November, with larger differences across species and sites for OFS. Foliar senescence started concurrently with CWG in most cases, except for the drier 2018 and, for beech, at the coldest site, where OFS occurred significantly later than CWG. Behavior of beech in Spain, the southern edge of its European distribution, was unclear, with no CWG, but very low wood growth at the time of OFS. Our study suggests that OFS is generally triggered by the same drivers of CWG or when wood growth decreases in late summer, indicating an overarching mechanism of sink limitation as a possible regulator of the timing of foliar senescence.
Ključne besede: autumn phenology, xylem formation, foliar senescence, cambium, chlorophyll, radial growth, wood, decidiuous trees, common aspen, common beech, pedunculate oak, silver birch
Objavljeno v DiRROS: 10.06.2020; Ogledov: 1899; Prenosov: 1138
.pdf Celotno besedilo (2,04 MB)
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8.
Low growth resilience to drought is related to future mortality risk in trees
Lucía De Soto, Maxime Cailleret, Frank Sterck, Steven Jansen, Koen Kramer, Elisabeth M.R. Robert, Tuomas Aakala, Mariano M. Amoroso, Christof Bigler, Jesus Julio Camarero, Katarina Čufar, Tom Levanič, 2020, izvirni znanstveni članek

Povzetek: Severe droughts have the potential to reduce forest productivity and trigger tree mortality. Most trees face several drought events during their life and therefore resilience to dry conditions might be crucial to long-term survival. We assess how growth resilience to severe droughts, including its components resistance and recovery, is related to the ability to survive future droughts by using a tree-ring database of surviving and now-dead trees from 118 sites (22 species, >3,500 trees). We find that, across the variety of regions and species sampled, trees that died during water shortages were less resilient to previous non-lethal droughts, relative to coexisting surviving trees of the same species. In angiosperms, drought-related mortality risk is associated with lower resistance (low capacity to reduce impact of the initial drought), while it is related to reduced recovery (low capacity to attain pre-drought growth rates) in gymnosperms. The different resilience strategies in these two taxonomic groups open new avenues to improve our understanding and prediction of drought-induced mortality. Resilience to drought is crucial for tree survival under climate change. Here, DeSoto et al. show that trees that died during drought were less resilient to previous dry events compared to surviving conspecifics, but the resilience strategies differ between angiosperms and gymnosperms.
Ključne besede: trees, mortality, gymnosperms, angiosperms, drought, resilience, resistance, recovery
Objavljeno v DiRROS: 20.02.2020; Ogledov: 1729; Prenosov: 1089
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