1. Polyethylene microplastics as a vector of tributyltin in Mytilus galloprovincialis and their consequencesTanja Kobal, Tea Zuliani, Stoimir Kolarević, Margareta Kračun-Kolarević, Tatjana Simčič, Tatjana Mijošek Pavin, Andreja Ramšak, 2026, izvirni znanstveni članek Povzetek: Microplastic pollution is an increasing environmental issue in the marine environment due to its ubiquitous presence and its role as a vector for organic pollutants such as tributyltin (TBT). Adsorption of TBT onto microplastics (MP) can increase its availability to filter-feeding organisms by prolonging its retention time in the water column. We investigated whether polyethylene (PE) MP spheres (10–63 μm) could act as vectors for TBT transfer in the mussel Mytilus galloprovincialis by exposing it to PE MP (50 mg L− 1 ) and TBT (0.001 mg L− 1 ) separately and in co-exposure for 21 days. Efficient adsorption on PE MP was confirmed, and higher concentration of TBT was observed in the PE MP + TBT group compared to TBT only exposed group, indicating a vector effect. This led to higher toxicity in mussels, as the combined stress conditions in the PE MP + TBT group resulted in a significant decrease in the catalase activity after 14 days of the exposure. Higher ETS activity was observed in both exposed groups after seven days of exposure, followed by lower ETS activity at 14 and 21 days, indicating depletion of energy reserves. Pronounced responses in catalase and electron transport system (ETS) activity were observed in the hepatopancreas compared to the gill tissue. DNA damage was present in all exposed groups and increased over time. Ključne besede: mytilus galloprovincialis, tributyltin, PE microplastics, mitochondrial respiration, genotoxicity, oxidative stress Objavljeno v DiRROS: 18.05.2026; Ogledov: 102; Prenosov: 77
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2. Metabolic rates of groundwater species as a function of body mass and temperatureTiziana Di Lorenzo, Nataša Mori, Tatjana Simčič, 2024, pregledni znanstveni članek Povzetek: Research on the metabolic physiology of groundwater species, particularly regarding oxygen consumption
rates (OCR), has made significant advancement, revealing valuable insights into the adaptations of exclusively
groundwater-dwelling (stygobitic) species. However, a comprehensive understanding of how these metabolic
rates scale with body mass and respond to temperature changes remains elusive. This study aims to bridge this
gap by reviewing published data on OCR across a variety of groundwater organisms to elucidate patterns of
metabolic rates in relation to body size and temperature. We employed a combination of literature review and
quantitative analyses, focusing on the allometric scaling of OCR with body weight and the effect of temperature on metabolic rates. Our findings indicate that OCR scales with body weight in an allometric pattern,
with an inter-species slope of 0.80, suggesting non-isometric scaling. Furthermore, our analysis showed that
stygobitic species’ metabolic rates are less responsive to warming than those of non-stygobitic species at low to
moderate temperatures. However, at higher temperatures, metabolic rates in stygobitic species decline faster
than in non-stygobitic taxa, highlighting a potential vulnerability to global climate change. This study contributes to our understanding of the metabolic strategies of groundwater species, underscoring the need for further
research to fully grasp the eco-evolutionary implications of these findings for groundwater conservation. Ključne besede: allometry, Arrhenius equation, ectotherms, metabolism, oxygen consumption rate, respiration, stygobiont Objavljeno v DiRROS: 13.09.2024; Ogledov: 1253; Prenosov: 934
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3. Analysis of subcellular energy metabolism in five Lacertidae lizards across varied environmental conditionsAnamarija Žagar, Urban Dajčman, Rodrigo Megía-Palma, Tatjana Simčič, Frederico Barroso, Senka Baškiera, Miguel A. Carretero, 2024, izvirni znanstveni članek Povzetek: Aerobic respiration is the main energy source for most eukaryotes, and efficient mitochondrial energy transfer greatly influences organismal fitness. To survive environmental changes, cells have evolved to adjust their biochemistry. Thus, measuring energy metabolism at the subcellular level can enhance our understanding of individual performance, population dynamics, and species distribution ranges. We investigated three important metabolic traits at the subcellular level in five lacertid lizard species sampled from different elevations, from sea level up to 2000 m. We examined hemoglobin concentration, two markers of oxidative stress (catalase activity and carbonyl concentration) and maximum rate of metabolic respiration at the subcellular level (potential metabolic activity at the electron transport system). The traits were analysed in laboratory acclimated adult male lizards to investigate the adaptive metabolic responses to the variable environmental conditions at the local sampling sites. Potential metabolic activity at the cellular level was measured at four temperatures – 28 °C, 30 °C, 32 °C and 34 °C – covering the range of preferred body temperatures of the species studied. Hemoglobin content, carbonyl concentration and potential metabolic activity did not differ significantly among species. Interspecific differences were found in the catalase activity, Potential metabolic activity increased with temperature in parallel in all five species. The highest response of the metabolic rate with temperature (Q10) and Arrhenius activation energy (Ea) was recorded in the high-mountain species Iberolacerta monticola. Ključne besede: physiology, lacertids, aerobic respiration, interspecific variability, hemoglobin, zoology Objavljeno v DiRROS: 03.09.2024; Ogledov: 1106; Prenosov: 1470
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4. Effect of temperature, water availability, and soil properties on soil CO2 efflux in beech-fir forests along the Carpathian Mts.Eva Dařenová, Pia Caroline Lipužič, Matjaž Čater, 2024, objavljeni povzetek znanstvenega prispevka na konferenci Ključne besede: canopy gap, carbon content, nitrogen content, soil respiration, soil water content, forest Objavljeno v DiRROS: 02.09.2024; Ogledov: 1328; Prenosov: 567
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5. Response of hyporheic biofilms to temperature changes and dissolved organic carbon enrichment: a mesocosm study : a mesocosm studyTatjana Simčič, Monika Poklukar, Nataša Mori, 2023, izvirni znanstveni članek Povzetek: Purpose
Hyporheic biofilms are the central site for biogeochemical cycling in streams and rivers. In view of global warming and increasing human pressures, this study aimed to compare the response of hyporheic biofilm biomass and activities from an unpolluted reference stream reach surrounded by forest with those from a stream reach exposed to agricultural and urban land use using a mesocosm experiment in which the water temperature and dissolved organic carbon (DOC) contents were manipulated.
Methods
Hyporheic sediments collected in the field from the two study reaches (i.e. reference and impacted) were incubated in the laboratory at two different temperatures (10 °C, 14 °C) and wetted with three types of synthetic water (control [C] – 0 mg L−1; low DOC – 5 mg L−1; high DOC – 30 mg L−1) for four weeks. The responses of the hyporheic biofilms were measured weekly using structural (total protein content [TPC] as a proxy for biofilm biomass) and functional measures (electron transport system activity [ETSA] and community-level physiological profiling [CLPP]).
Results
The response of hyporheic biofilms to temperature changes and DOC enrichment was site-specific for all studied measures (TPC, ETSA and CLPP, including measured average well colour development [AWCD]). The addition of DOC to biofilms from the pristine stream reach significantly heightened the responses at 10 °C, a temperature within the normal environmental temperature ranges of the reference location, but not at 14 °C, which was here, a temperature outside normal environmental range. On the other hand, biofilms from the impacted stream reach exhibited increased responses following DOC enrichment under both temperature regimes, with a particularly pronounced response at 14 ºC, in this case, both experimental temperatures were within the normal environmental temperature ranges of the study locations.
Conclusion
Hyporheic biofilms were shown to be, like benthic biofilms, sensitive to temperature changes and organic enrichment, but their response to temperature changes and enrichment caused by climate change and/or other anthropogenic pressures (i.e. point and non-point pollution, removal of the riparian zone, hydromorphological modifications, etc.) was not simply linear but site-specific. The intensity of the response, characterized by increased activity and biomass production, appears to be constrained within the temperature ranges prevalent in the environment from which the biofilms originate. These findings emphasize the importance of site-specific considerations in predicting the impacts of climate change and anthropogenic pressures on these critical components of river and stream ecosystems. Ključne besede: sediments, respiration, enzymes, functional indicators, interactions Objavljeno v DiRROS: 05.08.2024; Ogledov: 1243; Prenosov: 822
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6. Testing the influence of sediment granulometry on heterotrophic respiration with a new laboratory flow-through systemNataša Mori, Barbara Debeljak, David Kocman, Tatjana Simčič, 2017, izvirni znanstveni članek Povzetek: Purpose
Increased sedimentation due to land use intensification is increasingly affecting carbon processing in streams and rivers around the globe. This study describes the design of a laboratory-scale flow-through incubation system as a tool for the rapid estimation of sediment respiration. The measurements were compared with those obtained using an in situ closed chamber respiration method. The influence of sediment size on respiration rates was also investigated.
Materials and methods
Measurements were conducted on a pre-alpine gravel-bed river sediment separated into the following grain size fractions: > 60 mm (14.3%), 60–5 mm (60.2%), 5–2 mm (13.7%), 2–0.063 mm (11.1%) and <0.063 mm (0.6%). Concurrently, in situ and laboratory measurements were carried out on a naturally heterogeneous sediment. In situ respiration was determined in closed chambers as O2 consumption over time, while in the laboratory, respiration was determined using flow-through respiration chambers. Oxygen concentrations were measured using a fibre-optic oxygen meter positioned at the inflow and outflow from the chamber.
Results and discussion
The mean respiration rates within naturally mixed riverbed sediments were 1.27 ± 0.3 mg O2 dm−3 h−1 (n = 4) and 0.77 ± 0.1 mg O2 dm−3 h−1 (n = 3) for the flow-through chamber system and closed chamber system, respectively. Respiration rates were statistically significantly higher in the flow-through chamber system (t test, p < 0.05), indicating that closed chamber measurements underestimated the oxygen consumption within riverbed sediments. Sediment grain size was found to significantly affect respiration rates in both systems (ANOVA, p < 0.001) with the fine sediment fraction (particle size <0.063 mm) having the highest respiration rate (rflow-through = 51 ± 23 mg O2 dm−3 h−1). The smallest fractions (2–0.063 and <0.063 mm), which represent approximately 12% of total sediment volume, contributed 60% of total respiration.
Conclusions
The study demonstrated that flow-through respiration chambers more accurately estimate the respiration rate within riverbed sediments than in situ closed chambers, since the former experiment imitates the natural conditions where continuous interstitial flow occurs in the sediments. We also demonstrated that fine sediments (<5 mm) substantially contribute to heterotrophic respiration in the studied gravel-bed river. Ključne besede: carbon fluxes, freshwaters, geomorphology, hyporheic zone, respiration, sediments Objavljeno v DiRROS: 24.07.2024; Ogledov: 1145; Prenosov: 675
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7. Listening to the breath, chanting the word : the two breaths in María Zambrano’s Clearings of the forestRaquel Ferrández, 2023, izvirni znanstveni članek Povzetek: Clearings of the Forest (Claros del Bosque, 1977), one of the most poetic and chal-lenging works of María Zambrano’s thought, cannot be approached from a breath-less paradigm. For the immersion in these clearings take us into the breathing of being that we contemplate alongside the more obvious physiological breathing, the breathing of life. In this work, Zambrano proposes a poetic and mystical phe-nomenology of the breathing of being through the breathing of its word. Thus, to recover contact with this inner breathing could be to recover the lost chant of the word. This essay does not pretend to be a detailed analysis of Zambrano’s thought as a whole, nor of the vibrant mystery that her clearings reveal. The purpose is to uncover the fundamental role that breathing plays in this poetic-philosophical journey, along with other symbols such as light or love, with the question of what place this type of philosophical exercise occupies today in the classrooms of con-temporary universities. Ključne besede: poetic reason, María Zambrano, being, love, Unamuno, Ortega, respiration Objavljeno v DiRROS: 14.05.2024; Ogledov: 1122; Prenosov: 702
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8. From respiration to fleshpiration : a Merleau-Pontian journey into respiratory philosophy and respiratory religion with Jesus, St. Paul, Claudel, and Merleau-PontyPetri Joakim Berndtson, 2023, izvirni znanstveni članek Povzetek: In this article, I introduce a new word, the neologism “fleshpiration.” It is a word or a name in which I intertwine “flesh” and “spirit” or “spiration.” This new word is inspired by the thinking of Jesus, St. Paul, Paul Claudel, and Maurice Merleau-Ponty. The interpretative starting point of my article is taken from Clau-del, who states: “the spirit is respiration.” With Claudel’s idea, which has its roots in the etymological analysis of pneuma and spiritus, I interpret the spirit (pneuma) of Jesus and St. Paul to mean respiration in the first place. Within this respira-tory interpretative context, I suggest that both Jesus and St. Paul emphasised the essentiality of breathing in their religious thinking. For St. Paul, life according to the flesh and life according to the Spirit as life according to the Respiration are opposite lifestyles. Within the context of Merleau-Ponty, it can be said that St. Paul’s dichotomy between the flesh and the Spirit can be challenged and surpassed. For Merleau-Ponty, the flesh and the Spirit can be intertwined in a paradoxical manner. Within this framework of paradoxical thinking, it becomes possible to discover this new word “fleshpiration” and initially claim that it names a new res-piratory beginning for philosophy and religion. Ključne besede: Maurice Merleau-Ponty, Paul Claudel, Jesus, St. Paul, respiration, flesh, fleshpiration Objavljeno v DiRROS: 14.05.2024; Ogledov: 1087; Prenosov: 662
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9. Temporal changes in the epidemiology, management, and outcome from acute respiratory distress syndrome in European intensive care units : a comparison of two large cohortsYasser Sakr, Bruno François, Jordi Solé-Violan, Katarzyna Kotfis, Ulrich Jaschinski, Angel Estella, Marc Leone, Stephan M. Jakob, Xavier Wittebole, Luis E. Fontes, Viktorija Tomič, 2021, izvirni znanstveni članek Povzetek: Background. Mortality rates for patients with ARDS remain high. We assessed temporal changes in the epidemiology and management of ARDS patients requiring invasive mechanical ventilation in European ICUs. We also investigated the association between ventilatory settings and outcome in these patients. Methods. This was a post hoc analysis of two cohorts of adult ICU patients admitted between May 1–15, 2002 (SOAP study, n = 3147), and May 8–18, 2012 (ICON audit, n = 4601 admitted to ICUs in the same 24 countries as the SOAP study). ARDS was defined retrospectively using the Berlin definitions. Values of tidal volume, PEEP, plateau pressure, and FiO2 corresponding to the most abnormal value of arterial PO2 were recorded prospectively every 24 h. In both studies, patients were followed for outcome until death, hospital discharge or for 60 days. Results. The frequency of ARDS requiring mechanical ventilation during the ICU stay was similar in SOAP and ICON (327[10.4%] vs. 494[10.7%], p = 0.793). The diagnosis of ARDS was established at a median of 3 (IQ: 1–7) days after admission in SOAP and 2 (1–6) days in ICON. Within 24 h of diagnosis, ARDS was mild in 244 (29.7%), moderate in 388 (47.3%), and severe in 189 (23.0%) patients. In patients with ARDS, tidal volumes were lower in the later (ICON) than in the earlier (SOAP) cohort. Plateau and driving pressures were also lower in ICON than in SOAP. ICU (134[41.1%] vs 179[36.9%]) and hospital (151[46.2%] vs 212[44.4%]) mortality rates in patients with ARDS were similar in SOAP and ICON. High plateau pressure (> 29 cmH2O) and driving pressure (> 14 cmH2O) on the first day of mechanical ventilation but not tidal volume (> 8 ml/kg predicted body weight [PBW]) were independently associated with a higher risk of in-hospital death. Conclusion. The frequency of and outcome from ARDS remained relatively stable between 2002 and 2012. Plateau pressure > 29 cmH2O and driving pressure > 14 cmH2O on the first day of mechanical ventilation but not tidal volume > 8 ml/kg PBW were independently associated with a higher risk of death. These data highlight the continued burden of ARDS and provide hypothesis-generating data for the design of future studies. Ključne besede: respiratory insufficiency, artificial respiration, tidal volume, airway pressures, driving pressure Objavljeno v DiRROS: 16.06.2021; Ogledov: 3601; Prenosov: 1631
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10. Inter-observer reliability for different point-of-care lung ultrasound findings in mechanically ventilated critically ill COVID-19 patientsAlan Šustić, Marko Mirošević, Konstanty Szuldrzynski, Robert Marčun, Mehmed Haznadar, Matej Podbregar, Alen Protić, 2021, drugi znanstveni članki Ključne besede: COVID-19 -- diagnosis -- diagnostic imaging, ultrasonography, artificial respiration, critical care, critical illness, lung ultrasound, mechanical ventilation Objavljeno v DiRROS: 16.06.2021; Ogledov: 2463; Prenosov: 826
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