1. Spatiotemporal variability of dendroecological indicators in pedunculate oak (Quercus robur L.) tree-rings across Europe in relation to species distribution modelsAndrei Popa, Jernej Jevšenak, Marcin K. Dyderski, Radosław Puchałka, Allan Buras, Ionel Popa, Martin Wilmking, Aleksandra Kalisty, Catalin Constantin Roibu, Marcin Jakubowski, 2025, izvirni znanstveni članek Povzetek: Climate is a primary, but non-stationary, driver of tree growth. Climate change is altering the sensitivity of forest growth to water availability and temperature over time. It is considered that pedunculate oak (Quercus robur L.) will cope with the changing climatic conditions in Europe in the near future. However, while species distribution models project expansion zones, they also identify reductions in occurrence at the dry and warm distribution margins. Whereas species distribution models primarily rely on occurrence data, tree rings—given their long-term perspective and their use in empirical models—can provide a mechanistic view of forest growth dynamics, including temporally changing climate responses. Increased climate sensitivity and growth synchrony are key dendroecological indicators of tree stress. Here, we used an unprecedented network of 150 Q. robur sites (over 3300 trees), covering the full projected range of contracting to persistent areas across Europe, to assess the dendroecological indicators over recent decades in relation to species distribution model predictions. We reveal that oaks in areas projected to experience range contraction exhibited greater sensitivity to current growing season climatic conditions, whereas those in persistence areas responded more strongly to previous season conditions. Growth synchrony among trees was higher in the contraction areas, but showed no significant increasing trend over the last 70 years, as expected from ecotone theory. Temporal shifts in climate sensitivity were stronger for temperature and vapor pressure deficit in the persistence areas, whereas the climatic water balance gained importance in the contraction zones. These findings suggest that Q. robur growth is not yet being severely affected by climate change, and that the species is currently coping well with the climate changes, even in regions with projected range contractions, thereby challenging statistically derived scenarios of range shift based on species distribution models. Ključne besede: climate change scenarios, climate–growth relationships, climatic water balance, growth synchrony, range contraction, vapor pressure deficit Objavljeno v DiRROS: 04.11.2025; Ogledov: 124; Prenosov: 54
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2. Genomic signatures of climate-driven (mal)adaptation in an iconic conifer, the English Yew (Taxus baccata L.)Thomas Francisco, Santiago C. González-Martínez, Maria Mayol, Elia Vajana, Miquel Riba, Marjana Westergren, Stephen Cavers, Sara Pinosio, Francesca Bagnoli, Maurizio Marchi, Filipos Aravanopoulos, 2025, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: This dataset consists of a Variant Call Format (VCF) file containing genomic data from Taxus baccata (European yew). The dataset includes 11,374 single nucleotide polymorphisms (SNPs) identified across 490 individual trees sampled from across the European range of the species. This dataset was used to carry out a study investigating patterns of local adaptation and to assessing the risk of climate maladaptation using genomic offset approaches. English (2025-05-28) Ključne besede: climate change , genomic offset , genotype- environment association , local adaptation , Taxus baccata Objavljeno v DiRROS: 03.11.2025; Ogledov: 115; Prenosov: 30
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3. Potential metabolic activity, catalase activity, performance traits and morphological variables of 94 individuals belonging to Podarcis muralis species used in the analysis : version v1Anamarija Žagar, Veronica Gomes, Guillem Pérez i de Lanuza, Tatjana Simčič, Miguel A. Carretero, 2022, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: Potential Metabolic Activity (ETS26_P, ETS31_P, ETS36_P), Catalase Activity (CAT_P), Performance traits (BITE, SPRINT,CLIMB, MANO) and Morphological variables (snout-vent length (SVL), trunk length (TRL), pileus length (PL), head length (HL), head width (HW), head height (HH), fore limb length (FLL) and hind limb length (HLL) of 94 individuals belonging to Podarcis muralis species. The data was used in the analysis of the paper entitled: Is It Function or Fashion? An Integrative Analysis of Morphology, Performance, and Metabolism in a Colour Polymorphic Lizard, by authors Verónica Gomes, Anamarija Žagar, Guillem Pérez i de Lanuza, Tatjana Simčič and Miguel A. Carretero, published in the journal Diversity 2022, 14, 116. https://doi.org/10.3390/d14020116 Ključne besede: lizards, morphology, viviparity, sexual dimorphism, climate change, data Objavljeno v DiRROS: 27.10.2025; Ogledov: 124; Prenosov: 83
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4. Size, age, telomere and ecophysiology data of Gallotia galloti lizard species sampled in Tenerife : version v1Nina Guerra Serén, Rodrigo Megía-Palma, Tatjana Simčič, Miha Krofel, Fabio Maria Guarino, Catarina Pinho, Anamarija Žagar, Miguel A. Carretero, 2023, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: The dataset is used in the manuscript "Nina Serén, Rodrigo Megía-Palma, Tatjana Simčič, Miha Krofel, Fabio Maria Guarino, Catarina Pinho, Anamarija Žagar, Miguel A. Carretero. Functional responses in a lizard along a 3.5 km altitudinal gradient. Journal of Biogeography (under review)." The dataset consists of measurements of individual lizards of the species Gallotia galloti, each tagged with a unique CODE. Data include year of sampling, population name, exact elevation (in meters above sea level) and approximate elevation (rounded to the nearest hundred, in meters), and sex. Measurements were as follows: Snout Vent Length (in millimeters), Mass (in grams), AGE_Consensus (in years), Relative Telomere Length, PMA(29ºC, 33 ºC and 37ºC) (Potential metabolic activity measured at experimental conditions of 29˚C, 33ºC and 37ºC, respectively,in µLO2/mg prot/h), Catalase (in relative units U/mg protein), EWLa (accumulated evaporative water loss (in grams) and Temperature_8AM-5PM (measurements of cloacal temperature at hourly intervals starting at 8AM and ending at 5PM). Ključne besede: lizards, ecophysiology, oxydative stress, telomeres, climate change, data Objavljeno v DiRROS: 27.10.2025; Ogledov: 152; Prenosov: 79
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5. Viviparity is associated with larger female size and higher sexual size dimorphism in a reproductively bimodal lizardEvgeny S. Roitberg, Hans Recknagel, K. R. Elmer, Florentino Braña, Tania Rodríguez Díaz, Anamarija Žagar, Valentina Nikolaevna Kuranova, Lidiya Alekseevna Epova, Dirk Bauwens, Giovani Giovine, V. F. Orlova, N. A. Bulakhova, Galina Eplanova, Oscar Arribas, 2025, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: Squamate reptiles are central for studying phenotypic correlates of evolutionary transitions from oviparity to viviparity because these transitions are numerous, with many of them being recent. Several models of life-history theory predict that viviparity is associated with increased female size, and thus more female-biased sexual size dimorphism (SSD). Yet the corresponding empirical evidence is overall weak and inconsistent. The lizard Zootoca vivipara, which occupies a major part of Northern Eurasia and includes four viviparous and two non-sister oviparous lineages, represents an excellent model for testing these predictions. We analysed how sex-specific body size and SSD is associated with parity mode, using body length data for nearly 14,000 adult individuals from 97 geographically distinct populations, which cover almost the entire species’ range and represent all six lineages. Our analyses controlled for lineage identity, climatic seasonality (the strongest predictor of geographic body size variation in previous studies of this species), and several aspects of data heterogeneity. Parity mode, lineage, and seasonality are significantly associated with female size and SSD; the first two predictors accounted for 14–26% of the total variation each, while seasonality explained 5–7%. Viviparous populations exhibited a larger female size than oviparous populations, with no concomitant differences in male size. Variation of male size was overall low and poorly explained by our predictors. Albeit fully expected from theory, the strong female bias of the body size differences between oviparous and viviparous populations found in Z. vivipara is not evident from available data on three other lizard systems of closely related lineages differing in parity mode. We confront this pattern with the data on female reproductive traits in the considered systems and the frequencies of evolutionary changes of parity mode in the corresponding lizard families and speculate why the life-history correlates of live-bearing in Z. vivipara are distinct. Comparing conspecific populations, our study provides the most direct evidence for the predicted effect of parity mode on adult body size but also demonstrates that the revealed pattern may not be general. This might explain why across squamates, viviparity is only weakly associated with larger size. Ključne besede: lizards, morphology, viviparity, sexual dimorphism, climate change, data Objavljeno v DiRROS: 27.10.2025; Ogledov: 137; Prenosov: 80
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6. Contribution of genetic versus plastic responses to adaptive patterns in a widespread butterfly along a latitudinal clineFranziska Günter, Michaël Beaulieu, Kasimir F. Freiberg, Ines Welzel, Nia Toshkova, Anamarija Žagar, Tatjana Simčič, Klaus Fischer, 2020, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: Understanding how organisms adapt to complex environments is a central goal of evolutionary biology and ecology. This issue is of special interest in the current era of rapidly changing climatic conditions. Here, we investigate clinal variation and plastic responses in life history, morphology, and physiology in the butterfly Pieris napi along a pan-European gradient by exposing butterflies raised in captivity to different temperatures. We found clinal variation in body size, growth rates and concomitant development time, wing aspect ratio, wing melanisation, and heat tolerance. Individuals from warmer environments were more heat-tolerant, had less melanised wings and a shorter development but still they were larger than individuals from cooler environments. These findings suggest selection for rapid growth in the warmth and for wing melanisation in the cold, and thus fine-tuned genetic adaptation to local climates. Irrespective of the origin of butterflies, the effects of higher developmental temperature were largely as expected, speeding up development, reducing body size, potential metabolic activity, and wing melanisation, while increasing heat tolerance. At least in part, these patterns likely reflect adaptive phenotypic plasticity. In summary, our study revealed pronounced plastic and genetic responses, which may indicate high adaptive capacities in our study organism. Whether this may help such species though to deal with current climate change needs further investigation, as clinal patterns have typically evolved over long periods. Ključne besede: butterflies, morphology, physiology, genetics, climate change, data Objavljeno v DiRROS: 27.10.2025; Ogledov: 134; Prenosov: 75
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7. Data from: A metabolic syndrome in terrestrial ectotherms with different elevational and distribution patternsAnamarija Žagar, Miguel A. Carretero, Diana Marguč, Tatjana Simčič, Al Vrezec, 2018, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: The metabolic performance of ectotherms is expected to be driven by the environment in which they live. Ecologically similar species with contrasting elevation distributions occurring in sympatry at mid-elevations, provide good models for studying how physiological responses to temperature vary as a function of adaptation to different elevations.. Under sympatry, at middle elevations, where divergent species ranges overlap, sympatric populations are expected to have similar thermal responses, suggesting similar local acclimation or adaptation, while observed differences would suggest adaptation to each species’ core range. We analysed the metabolic traits of sympatric species pairs from three ectotherm groups: reptiles (Reptilia: Lacertidae), amphibians (Amphibia: Salamandridae) and beetles (Coleoptera: Carabidae), living at different elevations, in order to test how adaptation to different elevations affects metabolic responses to temperature. We experimentally tested the thermal response of respiration rate (RR) and estimated potential metabolic activity (PMA) at three temperature regimes surrounding the groups’ optimal activity body temperatures. RR was relatively similar among groups and showed a positive response to increasing temperature, which was more pronounced in the high-elevation species of reptiles and beetles. Relative to RR, PMA displayed a stronger and more consistent positive response to increased temperature in all three groups. For all three groups, the average biochemical capacity for metabolism (PMA) was higher in the range-restricted, high-elevation species, and this difference increased at higher temperatures in a consistent manner. These results, indicating consistent pattern in three independently evolved animal groups, suggest a ubiquitous adaptive syndrome and represent a novel understanding of the mechanisms shaping spatial biodiversity patterns. Our results also highlight the importance of geographic patterns for the mechanistic understanding of adaptations in physiological traits, including species’ potential to respond/adapt to global climate changes. Ključne besede: lizards, morphology, physiology, metabolism, climate change, data Objavljeno v DiRROS: 27.10.2025; Ogledov: 137; Prenosov: 75
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8. Genomic signatures of climate-driven (mal)adaptation in an iconic conifer, the English Yew (Taxus baccata L.)Thomas Francisco, Maria Mayol, Elia Vajana, Miquel Riba, Marjana Westergren, Stephen Cavers, Sara Pinosio, Francesca Bagnoli, Maurizio Marchi, Filipos Aravanopoulos, 2025, izvirni znanstveni članek Povzetek: The risk of climate maladaptation is increasing for numerous species, including trees. Developing robust methods to assess population maladaptation remains a critical challenge. Genomic offset approaches aim to predict climate maladaptation by characterizing the genomic changes required for populations to maintain their fitness under changing climates. In this study, we assessed the risk of climate maladaptation in European populations of English yew (Taxus baccata), a long-lived tree with a patchy distribution across Europe, the Atlas Mountains, and the Near East, where many populations are small or threatened. We found evidence suggesting local climate adaptation by analyzing 8616 SNPs in 475 trees from 29 European T. baccata populations, with climate explaining 18.1% of genetic variance and 100 unlinked climate-associated loci identified via genotype-environment association (GEA). Then, we evaluated the deviation of populations from the overall gene-climate association to assess variability in local adaptation or different adaptation trajectories across populations and found the highest deviations in low latitude populations. Moreover, we predicted genomic offsets and successfully validated these predictions using phenotypic traits assessed in plants from 26 populations grown in a comparative experiment. Finally, we integrated information from current local adaptation, genomic offset, historical genetic differentiation, and effective migration rates to show that Mediterranean and high-elevation T. baccata populations face higher vulnerability to climate change than low-elevation Atlantic and continental populations. Our study demonstrates the practical use of the genomic offset framework in conservation genetics, offers insights for its further development, and highlights the need for a population-centered approach that incorporates additional statistics and data sources to credibly assess climate vulnerability in wild plant populations. Ključne besede: climate change , genomic offset , genotype- environment association , local adaptation , Taxus baccata Objavljeno v DiRROS: 10.10.2025; Ogledov: 233; Prenosov: 97
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9. Environmental alterations and sea warming drive seagrass meadow decline in urbanized coastal areas of the northern Adriatic SeaFabrizio Gianni, Annalisa Falace, Martina Orlando-Bonaca, Saul Ciriaco, Danijel Ivajnšič, Sara Kaleb, Lovrenc Lipej, Borut Mavrič, Stefano Querin, Vinko Bandelj, 2025, izvirni znanstveni članek Povzetek: Seagrass meadows are important habitat builders, providing food, shelter, and nursery grounds for many species, alongside essential goods and ecosystem services for humanity. However, in the last decades, seagrass meadows have been subjected to numerous pressures, leading to their widespread decline. The northern Adriatic Sea is no exception, with seagrass regression observed notably between 2014 and 2018. This study aims to identify the drivers of the recent seagrass decline in the Gulf of Trieste through a spatial and temporal assessment of seagrass distribution. To assess the relationship between seagrass dynamics and environmental changes, spatiotemporal patterns of environmental variables were analyzed, and generalized additive models were applied for two different time periods: 2009-2013 and 2014-2018. Historical data on seagrass distribution was also collected and compared with the current distribution. Our findings indicate that Cymodocea nodosa remains the dominant species on the northern coast of the Gulf, with a decrease of 30% in Slovenian waters and up to 89% near Trieste (Italy) during 2014-2018. Analysis of physicochemical variables revealed an increase in seawater temperature across the Gulf and a change in nutrient load, particularly in Slovenia, where it decreased significantly. Models achieved high-performance scores, identifying photosynthetically active radiation, nutrients, temperature, and sediment type as key determinants of seagrass occurrence. Nonetheless, additional local-scale factors likely contributed to lower seagrass’ resilience to disturbances. These findings stress the need to develop integrated spatial planning strategies and provide a crucial baseline for future seagrass monitoring and restoration activities. Ključne besede: species distribution, climate change, anthropogenic disturbance, urbanization, Northern Adriatic Objavljeno v DiRROS: 08.10.2025; Ogledov: 210; Prenosov: 88
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10. Low but significant evolutionary potential for growth, phenology and reproduction traits in European beechMarjana Westergren, Juliette Archambeau, Marko Bajc, Rok Damjanić, Adélaïde Theraroz, Hojka Kraigher, Sylvie Oddou-Muratorio, Santiago C. González-Martínez, 2023, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: Local survival of forest tree populations under climate change depends on existing genetic variation and their adaptability to changing environments. Responses to selection were studied in European beech (Fagus sylvatica) under field conditions. A total of 1,087 adult trees, seeds, one-year-old seedlings, and established multiyear saplings were genotyped with 16 nuSSRs. Adult trees were assessed for phenotypic traits related to growth, phenology and reproduction. Parentage and paternity analyses were used to estimate effective female and male fecundity as a proxy of fitness and showed that few parents contributed to successful regeneration. Selection gradients were estimated from the relationship between traits and fecundity, while heritability and evolvability were estimated using mixed models and the breeder’s equation. Larger trees bearing more fruit and early male flowering had higher total fecundity, while trees with longer growth season had lower total fecundity (directional selection). Stabilising selection on spring phenology was found for female fecundity, highlighting the role of late frosts as a selection driver. Selection gradients for other traits varied between measurement years and the offspring cohort used to estimate parental fecundity. Compared to other studies in natural populations, we found low to moderate heritability and evolvability for most traits. Response to selection was higher for growth than for budburst, leaf senescence or reproduction traits, reflecting more consistent selection gradients across years and sex functions, and higher phenotypic variability in the population. Our study provides empirical evidence suggesting that populations of long-lived organisms such as forest trees can adapt locally, even at short-time scales. Ključne besede: climate change, Fagus sylvatica, heritability, in situ adaptation, response to selection, selection gradients Objavljeno v DiRROS: 10.09.2025; Ogledov: 209; Prenosov: 112
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