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1.
Computational methods for detecting insect vibrational signals in field vibroscape recordings
Matija Marolt, Matevž Pesek, Rok Šturm, Juan José López Díez, Behare Rexhepi, Meta Virant-Doberlet, 2025, izvirni znanstveni članek

Povzetek: The ecological significance of vibroscape has been largely overlooked, excluding an important part of the available information from ecosystem assessment. Insects rely primarily on substrate-borne vibrational signalling in their communication, which is why the majority of terrestrial insects are excluded from passive acoustic monitoring. The ability to monitor the biological component of the natural vibroscape has been limited due to a lack of data and methods to analyse the data. In this paper, we evaluate the use of deep learning models to automatically detect and classify vibrational signals from field recordings obtained with laser vibrometry. We created a dataset of annotated vibroscape recordings of meadow habitats, containing vibrational signals categorized as pulses, harmonic signals, pulse trains, and complex signals. We compared different deep neural network architectures for the detection and classification of vibrational signals, including convolutional and transformer models. The PaSST transformer architecture, which was fine-tuned from a pre-trained checkpoint demonstrated the highest performance on all tasks, achieving an average precision of 0.79 in signal detection. For signals with more than one hour of annotated data, the classification models achieved instance-based F1-scores above 0.8, enabling automatic analysis of activity patterns. In our case study, where 24-hour field recordings were analysed, the trained models (even those with lower precision) revealed interesting activity patterns of different species. The presented study, together with the dataset we publish with this paper, lays the foundation for further analysis of the vibroscape and the development of automated methods for ecotremological monitoring that complement passive acoustic monitoring and provide a comprehensive approach to ecosystem assessment.
Ključne besede: vibroscape, ecotremology, deep learning, automatic classification, biotremology, insects, zoology, laser vibrometry, ecosystem assessment
Objavljeno v DiRROS: 21.01.2025; Ogledov: 160; Prenosov: 81
.pdf Celotno besedilo (3,46 MB)
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2.
Monitoring populacij izbranih ciljnih vrst hroščev v letih 2016 in 2017 : prvo delno poročilo
Al Vrezec, Špela Ambrožič Ergaver, Andrej Kapla, elaborat, predštudija, študija

Povzetek: V končnem poročilu so predstavljeni rezultati terenskih raziskav štirih varstveno pomembnih vrst hroščev v Sloveniji v letu 2016. Za močvirskega krešiča (Carabus variolosus), rogača (Lucanus cervus), alpskega kozlička (Rosalia alpina) in bukovega kozlička (Morimus funereus) je v Sloveniji že vzpostavljena shema populacijskega in distribucijskega monitoringa. V tem poročilu so podani rezultati popisov populacijskega in distribucijskega monitoringa v letu 2016. V tem letu smo izvedli vzorčenja za populacijski monitoring za močvirskega krešiča (deseto snemanje), rogača (deseto snemanje), alpskega (deveto snemanje) in bukovega kozlička (osmo snemanje) ter vzorčenja za distribucijski monitoring za močvirskega krešiča in rogača (četrto leto v tretjem petletnem ciklusu). Dodatno so glede na najnovejše raziskave podani predlogi izboljšanja sheme monitoringa za rogača in alpskega kozlička. V poročilu so predstavljeni rezultati popisa v letih 2016 in 2017 za dopolnitev strokovnih podlag za puščavnika (Osmoderma eremita) in škrlatnega kukuja (Cucujus cinnaberinus). Za obe vrsti sta podani tudi predlogi sheme monitoringa. V okviru naloge smo opravili pregled vodnega telesa v Spodnjem Krapju in pet vodnih teles ob reki Muri za namene ugotavljanja prisotnosti ovratniškega plavača (Graphoderus bilineatus). Vrsto smo v letu 2017 zopet potrdili ob reki Muri in sicer v Murski šumi, kar je nova lokacija za vrsto v Sloveniji, ne pa tudi v mrtvici pri Spodnjem Krapju, ki je bila do nedavna edina recentna lokaliteta za vrsto pri nas, kjer je bil ovratniški plavač potrjen v letu 2011.
Ključne besede: hrošči, monitoring, ekologija
Objavljeno v DiRROS: 03.09.2024; Ogledov: 391; Prenosov: 770
.pdf Celotno besedilo (5,56 MB)
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3.
Monitoring čebel na travniku v parku Tivoli v letu 2022 : končno poročilo
Danilo Bevk, Rok Šturm, Blaž Koderman, 2022, končno poročilo o rezultatih raziskav

Povzetek: V Sloveniji je bilo do sedaj zabeleženih 573 vrst divjih čebel, vključujoč čmrlje in čebele samotarke. Divje čebele naseljujejo raznolike habitate, pri čemer ekstenzivni travniki igrajo pomembno vlogo pri zagotavljanju prehrane in gnezdišč za večino vrst. Čebele na cvetočih rastlinah nabirajo cvetni prah in medičino za svojo prehrano in prehrano zaroda. Pri tem opravljajo eno ključnih ekosistemskih storitev – opraševanje, tako divjih kot kmetijskih rastlin. Opraševalci so tako pomembni za ohranjanje biotske pestrosti in zagotavljanje prehranske varnosti.
Ključne besede: opraševalci, čebele, čmrlji, monitoring, park Tivoli, Ljubljana
Objavljeno v DiRROS: 02.09.2024; Ogledov: 362; Prenosov: 1865
.pdf Celotno besedilo (7,33 MB)
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4.
Predator-prey interactions and eavesdropping in vibrational communication networks
Meta Virant-Doberlet, Ana Kuhelj, Jernej Polajnar, Rok Šturm, 2019, pregledni znanstveni članek

Povzetek: Due to human perceptional bias in favor of air-borne sounds, substrate-borne vibrational signaling has been traditionally regarded as a highly specialized, inherently short-range and, consequently, a private communication channel, free from eavesdropping by sexual competitors and predators. In this review, we synthesize current knowledge pertinent to the view that most animals live in a rich vibratory world, where vibrational information is available to unintended receivers. In recent years, we realized that vibrational signaling is one of the oldest and taxonomically most widespread forms of communication by mechanical waves and that receptors detecting substrate vibrations are ubiquitous. In nature, substrate vibrations are reliable source of information readily available to all members of the animal community able to detect them. Viewing vibrational communication in more relevant ecological context reveals that animals relying on substrate vibrations live in complex communication networks. Long evolutionary history of this communication channel is reflected in varied and sophisticated predator-prey interactions guided by substrate-borne vibrations. Eavesdropping and exploitation of vibrational signals used in sexual communication have been so far largely neglected; however, existing studies show that generalist arthropod predators can intercept such signals emitted by insects to obtain information about prey availability and use that information when making foraging decisions. Moreover, males which advertise themselves for longer periods than females and with vibrational signals of higher amplitude face higher predation risk. It is likely that eavesdropping and exploitation of vibrational signals are major drivers in the evolution taking place in the vibratory world and we believe that studies of interspecific interactions guided by substrate vibrations will, in the future, offer numerous opportunities to unravel mechanisms that are central to understanding behavior in general.
Ključne besede: biotremology, vibrational communication, communication network, predator-prey interactions, eavesdropping
Objavljeno v DiRROS: 06.08.2024; Ogledov: 601; Prenosov: 532
.pdf Celotno besedilo (1,84 MB)
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5.
Hay meadow vibroscape and interactions within insect vibrational community
Rok Šturm, Behare Rexhepi, Juan José López Díez, Andrej Blejec, Jernej Polajnar, Jérôme Sueur, Meta Virant-Doberlet, 2021, izvirni znanstveni članek

Povzetek: Our experiences shape our knowledge and understanding of the world around us. The natural vibrational environment (vibroscape) is hidden to human senses but is nevertheless perceived and exploited by the majority of animals. Here, we show that the vibroscape recorded on plants in a temperate hay meadow is a dynamic low-frequency world, rich in species-specific vibrational signals. The overall vibroscape composition changed throughout the season and also depended on the plant species, as well as on the spatial position of individual plants within the meadow. Within the studied community, vibrationally signaling species sharing this communication channel avoided interference primarily by partitioning vibrational space on a fine temporal scale. The vibroscape is a reliable source of information in the environment and expands our understanding of ecological and evolutionary processes.
Objavljeno v DiRROS: 19.07.2024; Ogledov: 474; Prenosov: 304
.pdf Celotno besedilo (4,65 MB)
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6.
Is it time for ecotremology?
Rok Šturm, Juan José López Díez, Jernej Polajnar, Jérôme Sueur, Meta Virant-Doberlet, 2022, izvirni znanstveni članek

Povzetek: Our awareness of air-borne sounds in natural and urban habitats has led to the recent recognition of soundscape ecology and ecoacoustics as interdisciplinary fields of research that can help us better understand ecological processes and ecosystem dynamics. Because the vibroscape (i.e., the substrate-borne vibrations occurring in a given environment) is hidden to the human senses, we have largely overlooked its ecological significance. Substrate vibrations provide information crucial to the reproduction and survival of most animals, especially arthropods, which are essential to ecosystem functioning. Thus, vibroscape is an important component of the environment perceived by the majority of animals. Nowadays, when the environment is rapidly changing due to human activities, climate change, and invasive species, this hidden vibratory world is also likely to change without our notice, with potentially crucial effects on arthropod communities. Here, we introduce ecotremology, a discipline that mainly aims at studying substrate-borne vibrations for unraveling ecological processes and biological conservation. As biotremology follows the main research concepts of bioacoustics, ecotremology is consistent with the paradigms of ecoacoustics. We argue that information extracted from substrate vibrations present in the environment can be used to comprehensively assess and reliably predict ecosystem changes. We identify key research questions and discuss the technical challenges associated with ecotremology studies.
Ključne besede: ecotremology, monitoring, hidden biodiversity, vibroscape, vibrational communication
Objavljeno v DiRROS: 16.07.2024; Ogledov: 495; Prenosov: 272
.pdf Celotno besedilo (3,92 MB)
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