1. The genetic consequences of population marginality : a case study in maritime pineAdélaïde Theraroz, Santiago C. González-Martínez, Carlos Guadaño-Peyrot, Juliette Archambeau, Sara Pinosio, Francesca Bagnoli, Andrea Piotti, Camilla Avanzi, Giovanni G. Vendramin, Ricardo Alía, Delphine Grivet, Marjana Westergren, 2024, zaključena znanstvena zbirka raziskovalnih podatkov Povzetek: This dataset was produced by a consortium of European research Intitutes. For the data collection, needles were sampled from a total of 1,510 individuals from 82 maritime pine populations covering all previously identified gene pools throughout the species range. 10,185 SNPs were genotyped from the multispecies 4TREE SNPs chip (chip produced within the framework of the B4est project). This dataset was used to carry out a population genetics study. Ključne besede: population genetics, conservation genetics, marginal populations, Pinus pinaster, genetic indicators Objavljeno v DiRROS: 08.07.2025; Ogledov: 305; Prenosov: 231
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2. The genetic consequences of population marginality : a case study in maritime pineAdélaïde Theraroz, Carlos Guadaño-Peyrot, Juliette Archambeau, Sara Pinosio, Francesca Bagnoli, Andrea Piotti, Camilla Avanzi, Giovanni G. Vendramin, Ricardo Alía, Delphine Grivet, Marjana Westergren, Santiago C. González-Martínez, 2024, izvirni znanstveni članek Povzetek: Aim: Marginal tree populations, either those located at the edges of the species' rangeor in suboptimal environments, are often a valuable genetic resource for biologicalconservation. However, there is a lack of knowledge about the genetic consequencesof population marginality, estimated across entire species' ranges. Our study ad-dresses this gap by providing information about several genetic indicators and theirvariability in marginal and core populations identified using quantitative marginalityindices.Location: Southwestern Europe and North Africa.Methods: Using 10,185 SNPs across 82 populations of maritime pine (Pinus pinasterAit.), a widespread conifer characterised by a fragmented range, we modelled therelationship of seven genetic indicators potentially related to population evolution-ary resilience, namely genetic diversity (based on both all SNPs and outlier SNPs),inbreeding, genetic differentiation, recessive genetic load and genomic offset, withpopulation geographical, demo-historical and ecological marginality (as estimated bynine quantitative indices). Models were constructed for both regional (introducinggene pool as a random factor) and range-wide spatial scales.Results: We showed a trend towards decreasing overall genetic diversity and increas-ing differentiation with geographic marginality, supporting the centre-periphery hy-pothesis (CPH). However, we found no correlation between population inbreedingand marginality, while geographically marginal populations had a lower recessive ge-netic load (only models without the gene pool effect). Ecologically marginal popula-tions had a higher genomic offset, suggesting higher maladaptation to future climate,albeit some of these populations also had high genetic diversity for climate outliers.Main Conclusions: Overall genetic diversity (but not outlier-based estimates) and dif-ferentiation patterns support the CPH. Ecologically marginal populations and those atthe southern edge could be more vulnerable to climate change due to higher climate maladaptation, as predicted by genomic offsets, and/or lower potentially adaptive ge-netic diversity. This risk is exacerbated by typically small effective population sizesand increasing human impact in marginal populations. Ključne besede: population genetics, conservation genetics, marginal populations, Pinus pinaster, genetic indicators Objavljeno v DiRROS: 29.08.2024; Ogledov: 924; Prenosov: 900
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4. Forest genetics research in the mediterranean basin : bibliometric analysis, knowledge gaps, and perspectivesBruno Fady, Edoardo Esposito, Khaled Abulaila, Jelena M. Aleksic, Ricardo Alía, Paraskevi Alizoti, Ecaterina-Nicoleta Apostol, Filipos Aravanopoulos, Dalibor Ballian, Magda Bou Dagher Kharrat, Hojka Kraigher, Marjana Westergren, 2022, izvirni znanstveni članek Povzetek: Purpose of Review Recognizing that in the context of global change, tree genetic diversity represents a crucial resource for future forest adaptation, we review and highlight the major forest genetics research achievements of the past decades in biodiversity-rich countries of the Mediterranean region. For this, we conducted a bibliometric analysis of the scientific literature spanning the past thirty years (1991–2020). Putting together the representative regionwide expertise of our co-authorship, we propose research perspectives for the next decade. Recent Findings Forest genetics research in Mediterranean countries is organized into three different scientific domains of unequal importance. The domain “Population diversity and Differentiation” related to over 62% of all publications of the period, the domain “Environmental conditions, growth and stress response” to almost 23%, and the domain “Phylogeography” to almost 15%. Citation rate was trending the opposite way, indicating a strong and sustained interest in phylogeography and a rising interest for genetics research related to climate change and drought resistance. The share of publications from Asia and Africa to the total within the Mediterranean increased significantly during the 30-year period analyzed, reaching just below 30% during the last decade. Summary Describing poorly known species and populations, including marginal populations, using the full potential of genomic methods, testing adaptation in common gardens, and modeling adaptive capacity to build reliable scenarios for forest management remain strategic research priorities. Delineating areas of high and low genetic diversity, for conservation and restoration, respectively, is needed. Joining forces between forest management and forest research, sharing data, experience, and knowledge within and among countries will have to progress significantly, e.g., to assess the potential of Mediterranean genetic resources as assisted migration material worldwide. Ključne besede: conservation ·, forest genetic resources, genetic diversity, global change, Mediterranean, sustainable management Objavljeno v DiRROS: 09.12.2022; Ogledov: 1364; Prenosov: 861
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5. Forest genetic resources strategy for EuropeRicardo Alia, Filipos Aravanopoulos, K. B. Fjellstad, Michele Bozzano, Bruno Fady, Anna-Maria Farsakoglou, Santiago C. Gonzáles Martínez, Berthold Heinze, Gaye Kandemir, Czesław Kozioł, Hojka Kraigher, Francois Lefevre, Mari Rusanen, Ivan Scotti, Marjana Westergren, Frank Wolter, 2021, strokovna monografija Objavljeno v DiRROS: 11.01.2022; Ogledov: 1844; Prenosov: 996
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