1. CRITER 1.0 : a coarse reconstruction with iterative refinement network for sparse spatio-temporal satellite dataMatjaž Zupančič Muc, Vitjan Zavrtanik, Alexander Barth, Aida Alvera-Azcárate, Matjaž Ličer, Matej Kristan, 2025, izvirni znanstveni članek Povzetek: Satellite observations of sea surface temperature (SST) are essential for accurate weather forecasting and climate modeling. However, these data often suffer from incomplete coverage due to cloud obstruction and limited satellite swath width, which requires development of dense reconstruction algorithms. The current state of the art struggles to accurately recover high-frequency variability, particularly in SST gradients in ocean fronts, eddies, and filaments, which are crucial for downstream processing and predictive tasks. To address this challenge, we propose a novel two-stage method CRITER (Coarse Reconstruction with ITerative Refinement Network), which consists of two stages. First, it reconstructs low-frequency SST components utilizing a Vision Transformer-based model, leveraging global spatio-temporal correlations in the available observations. Second, a UNet type of network iteratively refines the estimate by recovering high-frequency details. Extensive analysis on datasets from the Mediterranean, Adriatic, and Atlantic seas demonstrates CRITER's superior performance over the current state of the art. Specifically, CRITER achieves up to 44 % lower reconstruction errors of the missing values and over 80 % lower reconstruction errors of the observed values compared to the state of the art. Ključne besede: deep learning, reconstruction algorithms, satellite measurements Objavljeno v DiRROS: 14.10.2025; Ogledov: 458; Prenosov: 230
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2. Application of the HIDRA2 deep-learning model for sea level forecasting along the Estonian coast of the Baltic SeaAmirhossein Barzandeh, Matjaž Ličer, Marko Rus, Matej Kristan, Ilja Maljutenko, Jüri Elken, Priidik Lagemaa, Rivo Uiboupin, 2025, izvirni znanstveni članek Povzetek: Sea level predictions, typically derived from 3D hydrodynamic models, are computationally intensive and subject to uncertainties stemming from physical representation and inaccuracies in initial or boundary conditions. As a complementary alternative, data-driven machine learning models provide a computationally efficient solution with comparable accuracy. This study employs the deep-learning model HIDRA2 to forecast hourly sea levels at five coastal stations along the Estonian coastline of the Baltic Sea, evaluating its performance across various forecast lead times. Compared to the regional NEMOBAL and subregional NEMOEST hydrodynamic models, HIDRA2 frequently outperforms both, particularly in terms of overall forecast skill. While HIDRA2 shows limitations in resolving high-frequency sea level variability above (6h) 1, it effectively reproduces energy in lower-frequency bands below (18h) 1. Errors tend to average out over longer time windows encompassing multiple seiche periods, enabling HIDRA2 to surpass the overall performance of the NEMO models. These findings underscore HIDRA2’s potential as a robust, efficient, and reliable tool for operational sea level forecasting and coastal management in the eastern Baltic Sea region. Ključne besede: sea flooding, deep learning, convolutional networks Objavljeno v DiRROS: 08.09.2025; Ogledov: 513; Prenosov: 224
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3. HIDRA3 : a deep-learning model for multipoint ensemble sea level forecasting in the presence of tide gauge sensor failuresMarko Rus, Hrvoje Mihanović, Matjaž Ličer, Matej Kristan, 2025, izvirni znanstveni članek Povzetek: Accurate modeling of sea level and storm surge dynamics with several days of temporal horizons is essential for effective coastal flood responses and the protection of coastal communities and economies. The classical approach to this challenge involves computationally intensive ocean models that typically calculate sea levels relative to the geoid, which must then be correlated with local tide gauge observations of sea surface height (SSH). A recently proposed deep-learning model, HIDRA2 (HIgh-performance Deep tidal Residual estimation method using Atmospheric data, version 2), avoids numerical simulations while delivering competitive forecasts. Its forecast accuracy depends on the availability of a sufficiently long history of recorded SSH observations used in training. This makes HIDRA2 less reliable for locations with less abundant SSH training data. Furthermore, since the inference requires immediate past SSH measurements as input, forecasts cannot be made during temporary tide gauge failures. We address the aforementioned issues using a new architecture, HIDRA3, that considers observations from multiple locations, shares the geophysical encoder across the locations, and constructs a joint latent state that is decoded into forecasts at individual locations. The new architecture brings several benefits: (i) it improves training at locations with scarce historical SSH data, (ii) it enables predictions even at locations with sensor failures, and (iii) it reliably estimates prediction uncertainties. HIDRA3 is evaluated by jointly training on 11 tide gauge locations along the Adriatic. Results show that HIDRA3 outperforms HIDRA2 and the Mediterranean basin Nucleus for European Modelling of the Ocean (NEMO) setup of the Copernicus Marine Environment Monitoring Service (CMEMS) by ∼ 15 % and ∼ 13 % mean absolute error (MAE) reductions at high SSH values, creating a solid new state of the art. The forecasting skill does not deteriorate even in the case of simultaneous failure of multiple sensors in the basin or when predicting solely from the tide gauges far outside the Rossby radius of a failed sensor. Furthermore, HIDRA3 shows remarkable performance with substantially smaller amounts of training data compared with HIDRA2, making it appropriate for sea level forecasting in basins with high regional variability in the available tide gauge data. Ključne besede: sea level modeling, deep learning, storm surges Objavljeno v DiRROS: 03.04.2025; Ogledov: 788; Prenosov: 446
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4. Uporaba numeričnih modelov ob razlitjih nafte na morjuDušan Žagar, Vanja Ramšak, Matjaž Ličer, Boris Petelin, Vlado Malačič, 2012, pregledni znanstveni članek Povzetek: Razlitje nafte v morju ima številne škodljive posledice na okolje in gospodarstvo. Potrebno je takojšnje ukrepanje pristojnih služb, ki si ob razlitju lahko pomagajo tudi z matematičnimi modeli, s katerimi je mogoče simulirati procese širjenja in razgradnje nafte. V prispevku je predstavljen pregled procesov in modelov širjenja naftnih madežev v morskem okolju. Opisan je model NAFTA3d in prikazana je njegova uporaba. Predstavljeni so vhodni podatki in rezultati modela na dveh možnih razlitjih v Tržaškem zalivu, pri čemer so upoštevane dejanske (nestacionarne) vremenske in hidrodinamične razmere. Prikazane so simulacije po taktičnem in prognostičnem načinu. Z vgrajenimi procesi in možnostjo povezav z različnimi modeli cirkulacije je lahko model NAFTA3d koristno dodatno orodje za ustrezne službe, ki skrbijo za omejitev širjenja in omilitev posledic ob morebitnih razlitjih nafte na morju. Ključne besede: morje, numerično modeliranje, naravne nesreče, cirkulacijski modeli, izlitja nafte, onesnaževanje, NAFTA3d, Jadransko morje Objavljeno v DiRROS: 26.03.2025; Ogledov: 693; Prenosov: 495
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5. Numerični modeli za določanje stanja morja v Jadranskem morjuMatjaž Ličer, Dušan Žagar, Maja Jeromel, Martin Vodopivec, 2012, pregledni znanstveni članek Povzetek: V prispevku predstavljamo glavne razloge za numerično modeliranje morja v Jadranskem morju in na kratko opisujemo modele, ki se trenutno uporabljajo v ta namen. Predstavljeni so cirkulacijski model POM za severno Jadransko morje, valovni model SWAN in model razlitja ogljikovodikov v morskem okolju NAFTA3d. Prikazani so tudi nekateri rezultati vseh navedenih modelov in trenutni načrti njihove implementacije. Ključne besede: morje, numerično modeliranje, naravne nesreče, cirkulacijski modeli, izlitja nafte, onesnaževanje, POM, Jadransko morje Objavljeno v DiRROS: 26.03.2025; Ogledov: 727; Prenosov: 468
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6. Criteria for the definition of relevant assessment scales for the pelagic habitat : deliverable D2.1bJanja Francé, Martin Vodopivec, Matjaž Ličer, Sanda Skejić, Cecilia Totti, Erika Magaletti, Antonella Penna, Roberta Congestri, Ivano Vascotto, 2023, končno poročilo o rezultatih raziskav Objavljeno v DiRROS: 19.12.2024; Ogledov: 936; Prenosov: 253
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7. Coastal high-frequency radars in the Mediterranean : Applications in support of science priorities and societal needsEmma Reyes, Eva Aguiar, Michele Bendoni, Maristella Berta, Carlo Brandini, Alejandro Cáceres-Euse, Fulvio Capodici, Vanessa Cardin, Daniela Cianelli, Giuseppe Ciraolo, Matjaž Ličer, 2022, pregledni znanstveni članek Povzetek: The Mediterranean Sea is a prominent climate-change hot spot, with many socioeconomically vital coastal areas being the most vulnerable targets for maritime safety, diverse met-ocean hazards and marine pollution. Providing an unprecedented spatial and temporal resolution at wide coastal areas, high-frequency radars (HFRs) have been steadily gaining recognition as an effective land-based remote sensing technology for continuous monitoring of the surface circulation, increasingly waves and occasionally winds. HFR measurements have boosted the thorough scientific knowledge of coastal processes, also fostering a broad range of applications, which has promoted their integration in coastal ocean observing systems worldwide, with more than half of the European sites located in the Mediterranean coastal areas. In this work, we present a review of existing HFR data multidisciplinary science-based applications in the Mediterranean Sea, primarily focused on meeting end-user and science-driven requirements, addressing regional challenges in three main topics: (i) maritime safety, (ii) extreme hazards and (iii) environmental transport process. Additionally, the HFR observing and monitoring regional capabilities in the Mediterranean coastal areas required to underpin the underlying science and the further development of applications are also analyzed. The outcome of this assessment has allowed us to provide a set of recommendations for future improvement prospects to maximize the contribution to extending science-based HFR products into societally relevant downstream services to support blue growth in the Mediterranean coastal areas, helping to meet the UN's Decade of Ocean Science for Sustainable Development and the EU's Green Deal goals. Ključne besede: coastal monitoring, Mediterranean Sea, multi-platform observing systems, oceanography Objavljeno v DiRROS: 05.08.2024; Ogledov: 1156; Prenosov: 732
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8. Coastal high-frequency radars in the Mediterranean : Status of operations and a framework for future developmentPablo Lorente, Eva Aguiar, Michele Bendoni, Maristella Berta, Carlo Brandini, Alejandro Cáceres-Euse, Fulvio Capodici, Daniela Cianelli, Giuseppe Ciraolo, Lorenzo Corgnati, Matjaž Ličer, 2022, pregledni znanstveni članek Povzetek: Due to the semi-enclosed nature of the Mediterranean Sea, natural disasters and anthropogenic activities impose stronger pressures on its coastal ecosystems than in any other sea of the world. With the aim of responding adequately to science priorities and societal challenges, littoral waters must be effectively monitored with high-frequency radar (HFR) systems. This land-based remote sensing technology can provide, in near-real time, fine-resolution maps of the surface circulation over broad coastal areas, along with reliable directional wave and wind information. The main goal of this work is to showcase the current status of the Mediterranean HFR network and the future roadmap for orchestrated actions. Ongoing collaborative efforts and recent progress of this regional alliance are not only described but also connected with other European initiatives and global frameworks, highlighting the advantages of this cost-effective instrument for the multi-parameter monitoring of the sea state. Coordinated endeavors between HFR operators from different multi-disciplinary institutions are mandatory to reach a mature stage at both national and regional levels, striving to do the following: (i) harmonize deployment and maintenance practices; (ii) standardize data, metadata, and quality control procedures; (iii) centralize data management, visualization, and access platforms; and (iv) develop practical applications of societal benefit that can be used for strategic planning and informed decision-making in the Mediterranean marine environment. Such fit-for-purpose applications can serve for search and rescue operations, safe vessel navigation, tracking of marine pollutants, the monitoring of extreme events, the investigation of transport processes, and the connectivity between offshore waters and coastal ecosystems. Finally, future prospects within the Mediterranean framework are discussed along with a wealth of socioeconomic, technical, and scientific challenges to be faced during the implementation of this integrated HFR regional network. Ključne besede: coastal regions, Mediterranean Sea, multi-platform observing systems, oceanography Objavljeno v DiRROS: 05.08.2024; Ogledov: 1040; Prenosov: 654
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9. DELWAVE 1.0 : deep learning surrogate model of surface wave climate in the Adriatic BasinPeter Mlakar, Antonio Ricchi, Sandro Carniel, Davide Bonaldo, Matjaž Ličer, 2024, izvirni znanstveni članek Povzetek: We propose a new point-prediction model, the DEep Learning WAVe Emulating model (DELWAVE), which successfully emulates the behaviour of a numerical surface ocean wave model (Simulating WAves Nearshore, SWAN) at a sparse set of locations, thus enabling numerically cheap large-ensemble prediction over synoptic to climate timescales. DELWAVE was trained on COSMO-CLM (Climate Limited-area Model) and SWAN input data during the period of 1971–1998, tested during 1998–2000, and cross-evaluated over the far-future climate time window of 2071–2100. It is constructed from a convolutional atmospheric encoder block, followed by a temporal collapse block and, finally, a regression block. DELWAVE reproduces SWAN model significant wave heights with a mean absolute error (MAE) of between 5 and 10 cm, mean wave directions with a MAE of 10–25°, and a mean wave period with a MAE of 0.2 s. DELWAVE is able to accurately emulate multi-modal mean wave direction distributions related to dominant wind regimes in the basin. We use wave power analysis from linearised wave theory to explain prediction errors in the long-period limit during southeasterly conditions. We present a storm analysis of DELWAVE, employing threshold-based metrics of precision and recall to show that DELWAVE reaches a very high score (both metrics over 95 %) of storm detection. SWAN and DELWAVE time series are compared to each other in the end-of-century scenario (2071–2100) and compared to the control conditions in the 1971–2000 period. Good agreement between DELWAVE and SWAN is found when considering climatological statistics, with a small (≤ 5 %), though systematic, underestimate of 99th-percentile values. Compared to control climatology over all wind directions, the mismatch between DELWAVE and SWAN is generally small compared to the difference between scenario and control conditions, suggesting that the noise introduced by surrogate modelling is substantially weaker than the climate change signal. Ključne besede: surrogate modelling, deep learning, DEep Learning WAVe Emulating model, DELWAVE, Simulating WAves Nearshore, SWAN Objavljeno v DiRROS: 05.08.2024; Ogledov: 1024; Prenosov: 660
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10. Modeling the ocean and atmosphere during an extreme bora event in northern Adriatic using one-way and two-way atmosphere-ocean couplingMatjaž Ličer, Peter Smerkol, Anja Fettich, Michalis Ravdas, Alexandros Papapostolou, Anneta Mantziafou, Benedikt Strajnar, Jure Cedilnik, Maja Jeromel, Jure Jerman, Sašo Petan, Vlado Malačič, Sarantis Sofianos, 2016, izvirni znanstveni članek Povzetek: We have studied the performances of (a) a two-way coupled atmosphere%ocean modeling system and (b) one-way coupled ocean model (forced by the atmosphere model), as compared to the available in situ measurements during and after a strong Adriatic bora wind event in February 2012, which led to extreme air%sea interactions. The simulations span the period between January and March 2012. The models used were ALADIN (Aire Limitée Adaptation dynamique Développement InterNational) (4.4 km resolution) on the atmosphere side and an Adriatic setup of Princeton ocean model (POM) (1%=30%1%=30 angular resolution) on the ocean side. The atmosphere%ocean coupling was implemented using the OASIS3-MCT model coupling toolkit. Two-way coupling ocean feedback to the atmosphere is limited to sea surface temperature. We have compared modeled atmosphere%ocean fluxes and sea temperatures from both setups to platform and CTD (conductivity, temperature, and depth) measurements from three locations in the northern Adriatic.We present objective verification of 2m atmosphere temperature forecasts using mean bias and standard deviation of errors scores from 23 meteorological stations in the eastern part of Italy. We show that turbulent fluxes from both setups differ up to 20° during the bora but not significantly before and after the event. When compared to observations, two-way coupling ocean temperatures exhibit a 4 times lower root mean square errors (RMSE) than those from one-way coupled system. Two-way coupling improves sensible heat fluxes at all stations but does not improve latent heat loss. The spatial average of the two-way coupled atmosphere component is up to 0.3 °C colder than the one-way coupled setup, which is an improvement for prognostic lead times up to 20 h. Daily spatial average of the standard deviation of air temperature errors shows 0.15 °C improvement in the case of coupled system compared to the uncoupled. Coupled and uncoupled circulations in the northern Adriatic are predominantly wind-driven and show no significant mesoscale differences. Ključne besede: sea, marine water, numerical modeling, physical oceanography, dense water, bora wind, Adriatic sea, Mediterranean sea, Adriatic shelf Objavljeno v DiRROS: 26.07.2024; Ogledov: 1257; Prenosov: 657
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