20.500.12556/DiRROS-19101 Evidence-based unification of potato gene models with the UniTato collaborative genome browser Potato (Solanum tuberosum) is the most popular tuber crop and a model organism. A variety of gene models for potato exist, and despite frequent updates, they are not unified. This hinders the comparison of gene models across versions, limits the ability to reuse experimental data without significant re-analysis, and leads to missing or wrongly annotated genes. Here, we unify the recent potato double monoploid v4 and v6 gene models by developing an automated merging protocol, resulting in a Unified poTato genome model (UniTato). We subsequently established an Apollo genome browser (unitato.nib.si) that enables public access to UniTato and further community-based curation. We demonstrate how the UniTato resource can help resolve problems with missing or misplaced genes and can be used to update or consolidate a wider set of gene models or genome information. The automated protocol, genome annotation files, and a comprehensive translation table are provided at github.com/NIB-SI/unitato. bioinformatics analysis plant genome annotation gene model annotations Phureja group GFF files poTato genome model UniTato bioinformatska analiza anotacije genskih modelov pregledovalnik genoma krompirja model krompirjevega genoma Solanum tuberosum Solanaceae true false true Angleški jezik Slovenski jezik Neznano 2024-06-11 17:05:32 2024-06-11 17:05:32 2024-09-09 15:32:54 0000-00-00 00:00:00 2024 0 0 Soavtorji: Jan Zrimec, Carissa Bleker, Nadja Nolte, Mojca Juteršek, Živa Ramšak, Kristina Gruden and Marko Petek; Nasl. z nasl. zaslona; Opis vira z dne 11. 6. 2024; str. 1-10 [art. no.] ǂ1352253 Vol. 15 2024 0000-00-00 Zaloznikova Objavljeno apc 0000-00-00 0000-00-00 2024-06-11 575.111 1664-462X 10.3389/fpls.2024.1352253 198532867 https://github.com/NIB-SI/unitato 1 0e7e32ff-2804-11ef-9c9e-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=26270 https://doi.org/10.3389/fpls.2024.1352253 1 0dcb7503-2804-11ef-9c9e-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=26269 RAZ_Zagorscak_Maja_2024.pdf RAZ_Zagorscak_Maja_2024.pdf 1 49CA7FA1A00DF725169F3692885B82F7 961d17b6bc6253c27422e339215758d0a72717f74cca426a980299d7cb9c9753 3ecd303d-2804-11ef-9c9e-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=26271 Nacionalni inštitut za biologijo 0 0 0