20.500.12556/DiRROS-18582 Virome analysis of irrigation water sources provides extensive insights into the diversity and distribution of plant viruses in agroecosystems Plant viruses pose a significant threat to agriculture. Several are stable outside their hosts, can enter water bodies and remain infective for prolonged periods of time. Even though the quality of irrigation water is of increasing importance in the context of plant health, the presence of plant viruses in irrigation waters is understudied. In this study, we conducted a large-scale high-throughput sequencing (HTS)-based virome analysis of irrigation and surface water sources to obtain complete information about the abundance and diversity of plant viruses in such waters. We detected nucleic acids of plant viruses from 20 families, discovered several novel plant viruses from economically important taxa, like Tobamovirus and observed the influence of the water source on the present virome. By comparing viromes of water and surrounding plants, we observed presence of plant viruses in both compartments, especially in cases of large-scale outbreaks, such as that of tomato mosaic virus. Moreover, we demonstrated that water virome data can extensively inform us about the distribution and diversity of plant viruses for which only limited information is available from plants. Overall, the results of the study provided extensive insights into the virome of irrigation waters from the perspective of plant health. It also suggested that an HTS-based water virome surveillance system could be used to detect potential plant disease outbreaks and to survey the distribution and diversity of plant viruses in the ecosystem. plant viruses environmental water testing high-throughput sequencing agroecosystems irrigation water virome rastlinski virusi okoljsko testiranje vode visoko zmogljivo sekvenciranje agroekosistemi viromi true false true Angleški jezik Slovenski jezik Neznano 2024-03-29 11:28:12 2024-03-29 11:28:15 2024-05-23 11:45:43 0000-00-00 00:00:00 2024 0 0 Soavtorji: Katarina Bačnik, Mark Paul Selda Rivarez, Ana Vučurović, Nataša Mehle, Maja Ravnikar, Ion Gutierrez-Aguirre, Denis Kutnjak; str. [1]-15 art. no. ǂ120712 Vol. 249 Feb. 2024 0000-00-00 Zaloznikova Objavljeno apc 0000-00-00 0000-00-00 2023-10-09 578 0043-1354 10.1016/j.watres.2023.120712 172665347 https://doi.org/10.1016/j.watres.2023.120712 1 b2bc5e47-edae-11ee-9dd4-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=25340 RAZ_Maksimovic_Olivera_2024.pdf RAZ_Maksimovic_Olivera_2024.pdf 1 7B6B06273D709F57587011AD02B19CB1 60eb1ab4d30b6ec3b318aadc179d2714f80887c203d77fdd08fb765ac7e4636c 0d311126-edaf-11ee-9dd4-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=25341 Nacionalni inštitut za biologijo 0 0 0