20.500.12556/DiRROS-18580 Increased diversity of citrus tristeza virus in Europe This study investigated the genetic diversity of citrus tristeza virus (CTV) isolates from Montenegro and Croatia, European countries with the northernmost citrus growing regions situated on the Eastern Adriatic coast. Fifteen complete or nearly complete CTV genomes were reconstructed from high-throughput sequencing of samples collected in distinct municipalities in Montenegro and Opuzen municipality in Croatia. Phylogenetic analyses assigned some of the sequences to VT and T30 strains, previously recorded in Europe, while remarkably other isolates were placed in S1 and RB groups, which have not been reported in Europe so far. In addition, a new phylogenetic lineage including only isolates from Montenegro was delineated and tentatively proposed as the MNE cluster. Recombination analysis revealed evidence of 11 recombination events in the sequences obtained in this study, between isolates of related strains, within isolates of the same strain, and between distant strains. These findings show that CTV diversity in Europe is higher than reported before and calls for the re-evaluation of management strategies. complete genomes genotyping citrus tristeza virus CTV non-EU strain genomi genotipizacija HTS virus tristeza citrusov rastlinske bolezni true false true Angleški jezik Slovenski jezik Neznano 2024-03-29 06:26:00 2024-03-29 06:26:01 2024-05-23 11:46:15 0000-00-00 00:00:00 2023 0 0 Soavtorji: Miroslav Čizmović, Ana Vučurović, Paolo Margaria, and Dijana Škorić; Published online: 21 Nov 2023; Članek v PDF formatu obsega 34 str.; 2023 0000-00-00 Zaloznikova Objavljeno NiDoloceno 0000-00-00 0000-00-00 2023-11-21 632 0191-2917 10.1094/PDIS-09-23-1718-RE 179551235 https://doi.org/10.1094/PDIS-09-23-1718-RE 1 75265bd5-ed84-11ee-9dd4-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=25334 pdis-09-23-1718-re.pdf pdis-09-23-1718-re.pdf 1 A579E02147A5C4120382514AE8F861F1 73414d74c8440fec473a4716603bd881597d47bed1c59687014ecd8e49495907 bb6c5cd6-ed84-11ee-9dd4-001a4af901a5 https://dirros.openscience.si/Dokument.php?lang=slv&id=25335 Nacionalni inštitut za biologijo 0 0 0